Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
SCN2AQ99250 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.65□□□□□ -2.15
SCN2AQ99250 Z82195.2-201ENST00000612348 18351 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 RNU6-522P-201ENST00000364497 107 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 Y_RNA.516-201ENST00000384541 124 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 CYCSP48-201ENST00000417124 323 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AC244670.1-201ENST00000436879 112 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 CALM1P1-201ENST00000442082 433 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 RNU6-1037P-201ENST00000459571 107 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AC107401.1-201ENST00000503426 685 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.64□□□□□ -2.15
SCN2AQ99250 AC079598.5-201ENST00000547460 117 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.64□□□□□ -2.15
SCN2AQ99250 MIR4303-201ENST00000581299 66 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 MIR3935-201ENST00000583472 104 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.64□□□□□ -2.15
SCN2AQ99250 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AC092747.3-201ENST00000603769 301 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AL670379.10-201ENST00000604330 253 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AL670379.2-201ENST00000604983 252 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AL670379.9-201ENST00000605428 253 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 Z82243.1-201ENST00000609432 473 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 HMGB1P24-202ENST00000615653 685 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AC103705.1-201ENST00000619013 241 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AC024614.3-201ENST00000637860 256 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 SNORD56.1-201ENST00000362913 68 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AL591034.2-201ENST00000402839 359 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.64□□□□□ -2.15
SCN2AQ99250 EIF4EP4-201ENST00000424916 578 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.64□□□□□ -2.15
SCN2AQ99250 AL161788.1-201ENST00000441805 169 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.64□□□□□ -2.15
SCN2AQ99250 RNU7-180P-201ENST00000459240 63 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AL121769.1-201ENST00000469473 401 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AC087884.1-201ENST00000469738 328 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.64□□□□□ -2.15
SCN2AQ99250 SNORA31.16-201ENST00000516773 139 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AC109479.2-201ENST00000517842 174 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.64□□□□□ -2.15
SCN2AQ99250 AC090517.1-201ENST00000569307 266 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 MIR4781-201ENST00000585250 76 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 BNIP3P25-201ENST00000596023 559 ntBASIC1.64□□□□□ -2.15
SCN2AQ99250 FER-210ENST00000628534 558 ntTSL 5 BASIC1.64□□□□□ -2.15
SCN2AQ99250 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SCN2AQ99250 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.64□□□□□ -2.15
SCN2AQ99250 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
SCN2AQ99250 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
SCN2AQ99250 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SCN2AQ99250 RNU6-1285P-201ENST00000363480 105 ntBASIC1.63□□□□□ -2.15
SCN2AQ99250 Y_RNA.157-201ENST00000363638 102 ntBASIC1.63□□□□□ -2.15
SCN2AQ99250 SNORA26.3-201ENST00000391119 136 ntBASIC1.63□□□□□ -2.15
SCN2AQ99250 MTCO3P40-201ENST00000392516 676 ntBASIC1.63□□□□□ -2.15
SCN2AQ99250 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.63□□□□□ -2.15
SCN2AQ99250 AL117339.3-201ENST00000418733 162 ntBASIC1.63□□□□□ -2.15
SCN2AQ99250 AC091885.1-201ENST00000506658 268 ntBASIC1.63□□□□□ -2.15
SCN2AQ99250 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.63□□□□□ -2.15
SCN2AQ99250 RNU6-1281P-201ENST00000516223 105 ntBASIC1.63□□□□□ -2.15
SCN2AQ99250 MIR514B-201ENST00000516774 80 ntBASIC1.63□□□□□ -2.15
SCN2AQ99250 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.63□□□□□ -2.15
SCN2AQ99250 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.63□□□□□ -2.15
SCN2AQ99250 AC007375.1-201ENST00000554513 578 ntBASIC1.63□□□□□ -2.15
SCN2AQ99250 MIR3136-201ENST00000583498 78 ntBASIC1.63□□□□□ -2.15
SCN2AQ99250 Y_RNA.167-201ENST00000363735 109 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 RNU6-1090P-201ENST00000364065 94 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 SNORD32A-201ENST00000364805 84 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 Y_RNA.554-201ENST00000384672 102 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 MIR29B2-201ENST00000385055 81 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 MIR1287-201ENST00000408492 90 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 ERLEC1P1-201ENST00000433806 578 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 MTND1P18-201ENST00000448191 573 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 RNU7-167P-201ENST00000459160 62 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.62□□□□□ -2.15
SCN2AQ99250 RPL30P1-201ENST00000488676 339 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 RPL36AP21-201ENST00000490372 323 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 RNU2-44P-201ENST00000516795 194 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 SNORA31.23-201ENST00000517219 133 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 RNU1-104P-201ENST00000517280 175 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.62□□□□□ -2.15
SCN2AQ99250 CBX3P4-201ENST00000538909 354 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.62□□□□□ -2.15
SCN2AQ99250 CPDP1-201ENST00000579660 283 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.62□□□□□ -2.15
SCN2AQ99250 MIR5194-201ENST00000582634 120 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 AC078899.2-201ENST00000595282 212 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 AC012557.2-201ENST00000605919 418 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 U4atac.1-201ENST00000618345 95 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 RNU6-142P-201ENST00000384019 107 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 U3.40-201ENST00000408706 208 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 Y_RNA.619-201ENST00000410951 90 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 AL161651.1-201ENST00000440882 223 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 RNU6-333P-201ENST00000459117 107 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 AC083904.1-201ENST00000487828 231 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 AC008628.2-201ENST00000502605 298 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.62□□□□□ -2.15
SCN2AQ99250 NDUFA5P6-201ENST00000542110 379 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.62□□□□□ -2.15
SCN2AQ99250 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.62□□□□□ -2.15
SCN2AQ99250 EIF1P4-201ENST00000572664 335 ntBASIC1.62□□□□□ -2.15
SCN2AQ99250 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.62□□□□□ -2.15
SCN2AQ99250 RNU6-85P-201ENST00000605989 107 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms