Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RNU6-22P-201ENST00000384355 107 ntBASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.569-201ENST00000384749 103 ntBASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU2-61P-201ENST00000411069 191 ntBASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 PIGFP3-201ENST00000441918 722 ntBASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 MRPS10P1-201ENST00000448483 130 ntBASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 AC021205.2-201ENST00000480069 347 ntBASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 AC010265.1-201ENST00000513509 211 ntBASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.44□□□□□ -1.86
CDK5RAP1Q96SZ6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 SNORD63-201ENST00000384262 68 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU6-1289P-201ENST00000384431 106 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU6-1117P-201ENST00000384525 104 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 SNORA22C-201ENST00000384614 134 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 MIR514A1-201ENST00000385133 98 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 SNORA53-201ENST00000391141 249 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU6-131P-201ENST00000391144 107 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 RPL19P1-201ENST00000411635 428 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 RPL23AP83-201ENST00000434984 473 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 CYCSP32-201ENST00000440548 321 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 AC009296.1-201ENST00000443146 155 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 Y_RNA.638-201ENST00000459374 113 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 AP001324.2-201ENST00000461163 319 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 AC087588.1-201ENST00000462203 316 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 AP000870.1-201ENST00000472927 406 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 RPL30P1-201ENST00000488676 339 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 AC091874.1-201ENST00000511402 339 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 SNORA70.24-201ENST00000517233 118 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 MIR4282-201ENST00000583613 67 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 AL365222.1-201ENST00000614661 98 ntBASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDK5RAP1Q96SZ6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU6-326P-201ENST00000365480 107 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 SNORD116-18-201ENST00000383961 92 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU6-166P-201ENST00000384371 107 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 MIR32-201ENST00000384965 70 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 RPS4XP3-201ENST00000398541 413 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 AC007560.1-201ENST00000426912 237 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 AC016700.2-201ENST00000446011 156 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 FABP5P15-201ENST00000453566 214 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 AC006539.3-201ENST00000454258 129 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 snoU13.30-201ENST00000458951 104 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 COX6CP14-201ENST00000469580 174 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 AC140059.1-201ENST00000489238 361 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 RPL23AP75-201ENST00000491601 451 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 AC091959.1-201ENST00000495857 238 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU7-110P-201ENST00000516891 62 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 SNORA31.19-201ENST00000517079 126 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 AC027288.2-201ENST00000553028 243 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 AP000787.2-201ENST00000604432 568 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 AL162713.1-201ENST00000604480 262 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 YPEL5P2-201ENST00000605553 359 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 AC107294.1-201ENST00000609524 467 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 MIR7112-201ENST00000616126 65 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 SNORA50A-202ENST00000629536 136 ntBASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
CDK5RAP1Q96SZ6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 SDAD1P2-201ENST00000441308 2028 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 SNORA25.1-201ENST00000362326 128 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 AL591034.1-201ENST00000407447 340 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 SNORD12B-201ENST00000410433 91 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 MTCO1P39-201ENST00000426148 480 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 RPS15AP7-201ENST00000439294 405 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 BX510359.1-201ENST00000456973 237 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 snoU13.4-201ENST00000458916 104 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 RPL26P26-201ENST00000480251 434 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU6-377P-201ENST00000515965 102 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU6-966P-201ENST00000516479 104 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 RNU6-1256P-201ENST00000516539 103 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 AL121603.1-201ENST00000553815 142 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 MIR5004-201ENST00000579078 107 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 RPL23AP88-201ENST00000605759 454 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 AC005828.6-201ENST00000606610 232 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 SNORD113-5-201ENST00000607261 78 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 MIR4275-201ENST00000636486 87 ntBASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDK5RAP1Q96SZ6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms