Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 Y_RNA.804-201ENST00000615262 101 ntBASIC2.73□□□□□ -1.97
SIN3AQ96ST3 HAUS6P2-201ENST00000433254 2404 ntBASIC2.73□□□□□ -1.97
SIN3AQ96ST3 AC009487.4-201ENST00000624969 3585 ntBASIC2.73□□□□□ -1.97
SIN3AQ96ST3 ZNF355P-201ENST00000427301 3216 ntBASIC2.73□□□□□ -1.97
SIN3AQ96ST3 MTND4P23-201ENST00000447723 1363 ntBASIC2.73□□□□□ -1.97
SIN3AQ96ST3 AC092881.1-201ENST00000638218 2733 ntBASIC2.72□□□□□ -1.97
SIN3AQ96ST3 RNU6-325P-201ENST00000411132 105 ntBASIC2.72□□□□□ -1.97
SIN3AQ96ST3 RNU6-293P-201ENST00000411259 106 ntBASIC2.72□□□□□ -1.97
SIN3AQ96ST3 CYCSP49-201ENST00000420810 319 ntBASIC2.72□□□□□ -1.97
SIN3AQ96ST3 SNAP23P1-201ENST00000433229 246 ntBASIC2.72□□□□□ -1.97
SIN3AQ96ST3 AC243964.1-201ENST00000441814 261 ntBASIC2.72□□□□□ -1.97
SIN3AQ96ST3 snoU13.26-201ENST00000459452 105 ntBASIC2.72□□□□□ -1.97
SIN3AQ96ST3 RNU6-1037P-201ENST00000459571 107 ntBASIC2.72□□□□□ -1.97
SIN3AQ96ST3 YWHAEP4-201ENST00000505390 198 ntBASIC2.72□□□□□ -1.97
SIN3AQ96ST3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.72□□□□□ -1.97
SIN3AQ96ST3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.72□□□□□ -1.97
SIN3AQ96ST3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.72□□□□□ -1.97
SIN3AQ96ST3 BNIP3P16-201ENST00000589779 534 ntBASIC2.72□□□□□ -1.97
SIN3AQ96ST3 RNA5SP393-201ENST00000363423 117 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 Y_RNA.151-201ENST00000363566 112 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 RNU6-1317P-201ENST00000364582 104 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 Y_RNA.263-201ENST00000364659 114 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 RNA5SP37-201ENST00000365420 130 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 Y_RNA.474-201ENST00000384341 102 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 RNU6-692P-201ENST00000384496 107 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 AL591043.1-201ENST00000432461 424 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 RPS15AP10-201ENST00000432472 382 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 SNRPEP8-201ENST00000442866 260 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 MTND4P17-201ENST00000470444 350 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.71□□□□□ -1.98
SIN3AQ96ST3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.71□□□□□ -1.98
SIN3AQ96ST3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 CPDP1-201ENST00000579660 283 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 AC090897.2-201ENST00000581715 130 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 AC116312.1-201ENST00000606841 314 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 RNU6-91P-201ENST00000607774 107 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 uc_338.14-201ENST00000613162 166 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 AC025253.1-201ENST00000613623 543 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 AC241585.2-209ENST00000638217 143 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 AC026241.1-201ENST00000517873 2142 ntBASIC2.71□□□□□ -1.98
SIN3AQ96ST3 AC080100.1-201ENST00000624239 5356 ntBASIC2.7□□□□□ -1.98
SIN3AQ96ST3 AL109809.4-201ENST00000603520 2185 ntBASIC2.7□□□□□ -1.98
SIN3AQ96ST3 SNORA68.1-201ENST00000364537 132 ntBASIC2.7□□□□□ -1.98
SIN3AQ96ST3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SIN3AQ96ST3 RN7SKP158-201ENST00000410453 326 ntBASIC2.7□□□□□ -1.98
SIN3AQ96ST3 AC022028.1-201ENST00000412054 408 ntBASIC2.7□□□□□ -1.98
SIN3AQ96ST3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.7□□□□□ -1.98
SIN3AQ96ST3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.7□□□□□ -1.98
SIN3AQ96ST3 PTP4A1P4-201ENST00000512479 322 ntBASIC2.7□□□□□ -1.98
SIN3AQ96ST3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.7□□□□□ -1.98
SIN3AQ96ST3 SNORA31.18-201ENST00000517043 134 ntBASIC2.7□□□□□ -1.98
SIN3AQ96ST3 IGLV3-17-201ENST00000519099 244 ntBASIC2.7□□□□□ -1.98
SIN3AQ96ST3 AC010186.2-204ENST00000537668 439 ntBASIC2.7□□□□□ -1.98
SIN3AQ96ST3 POLR3GP2-201ENST00000588366 668 ntBASIC2.7□□□□□ -1.98
SIN3AQ96ST3 RPS15AP11-201ENST00000594193 385 ntBASIC2.7□□□□□ -1.98
SIN3AQ96ST3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SIN3AQ96ST3 AL133215.3-201ENST00000609801 448 ntBASIC2.7□□□□□ -1.98
SIN3AQ96ST3 AL132765.2-201ENST00000610812 351 ntBASIC2.7□□□□□ -1.98
SIN3AQ96ST3 MIR6845-201ENST00000613182 61 ntBASIC2.7□□□□□ -1.98
SIN3AQ96ST3 AL161423.1-201ENST00000613700 262 ntBASIC2.7□□□□□ -1.98
SIN3AQ96ST3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SIN3AQ96ST3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.69□□□□□ -1.98
SIN3AQ96ST3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SIN3AQ96ST3 RNU6-1083P-201ENST00000384022 107 ntBASIC2.69□□□□□ -1.98
SIN3AQ96ST3 AL513475.1-201ENST00000406602 315 ntBASIC2.69□□□□□ -1.98
SIN3AQ96ST3 RNU4-14P-201ENST00000410858 122 ntBASIC2.69□□□□□ -1.98
SIN3AQ96ST3 RNU2-41P-201ENST00000410991 178 ntBASIC2.69□□□□□ -1.98
SIN3AQ96ST3 AL139396.1-201ENST00000421137 167 ntBASIC2.69□□□□□ -1.98
SIN3AQ96ST3 RPS3AP52-201ENST00000435639 297 ntBASIC2.69□□□□□ -1.98
SIN3AQ96ST3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.69□□□□□ -1.98
SIN3AQ96ST3 AL441985.1-201ENST00000457727 251 ntBASIC2.69□□□□□ -1.98
SIN3AQ96ST3 RPL9P9-202ENST00000466501 579 ntBASIC2.69□□□□□ -1.98
SIN3AQ96ST3 AC018437.1-201ENST00000492214 406 ntBASIC2.69□□□□□ -1.98
SIN3AQ96ST3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.69□□□□□ -1.98
SIN3AQ96ST3 FGF7P4-201ENST00000509595 295 ntBASIC2.69□□□□□ -1.98
SIN3AQ96ST3 RNU6-277P-201ENST00000516272 106 ntBASIC2.69□□□□□ -1.98
SIN3AQ96ST3 AC243960.4-201ENST00000600532 288 ntBASIC2.69□□□□□ -1.98
SIN3AQ96ST3 AC063943.3-201ENST00000615562 356 ntBASIC2.69□□□□□ -1.98
SIN3AQ96ST3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.69□□□□□ -1.98
SIN3AQ96ST3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.69□□□□□ -1.98
SIN3AQ96ST3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SIN3AQ96ST3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SIN3AQ96ST3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SIN3AQ96ST3 Y_RNA.529-201ENST00000384586 119 ntBASIC2.68□□□□□ -1.98
SIN3AQ96ST3 RNU6-306P-201ENST00000384617 107 ntBASIC2.68□□□□□ -1.98
SIN3AQ96ST3 RNU6-1106P-201ENST00000390845 107 ntBASIC2.68□□□□□ -1.98
SIN3AQ96ST3 RNA5SP390-201ENST00000410191 113 ntBASIC2.68□□□□□ -1.98
SIN3AQ96ST3 AC074085.1-201ENST00000413598 418 ntBASIC2.68□□□□□ -1.98
SIN3AQ96ST3 AL513477.1-202ENST00000417061 214 ntBASIC2.68□□□□□ -1.98
SIN3AQ96ST3 AL445685.2-201ENST00000422551 342 ntBASIC2.68□□□□□ -1.98
SIN3AQ96ST3 FABP5P14-201ENST00000437273 393 ntBASIC2.68□□□□□ -1.98
SIN3AQ96ST3 AC093019.1-201ENST00000443135 252 ntBASIC2.68□□□□□ -1.98
SIN3AQ96ST3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.68□□□□□ -1.98
SIN3AQ96ST3 RPS29P27-201ENST00000463711 170 ntBASIC2.68□□□□□ -1.98
SIN3AQ96ST3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.68□□□□□ -1.98
SIN3AQ96ST3 RNU6-612P-201ENST00000516909 102 ntBASIC2.68□□□□□ -1.98
SIN3AQ96ST3 RAB11AP2-201ENST00000545905 639 ntBASIC2.68□□□□□ -1.98
SIN3AQ96ST3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.68□□□□□ -1.98
SIN3AQ96ST3 AL117336.2-201ENST00000602435 335 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms