Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 USP9YP11-201ENST00000427537 717 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 MTCYBP39-201ENST00000437562 491 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.24□□□□□ -2.37
AP1S3Q96PC3 AL031313.1-201ENST00000448435 256 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 AL163973.1-201ENST00000484753 577 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 HMGN1P12-201ENST00000499125 195 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.24□□□□□ -2.37
AP1S3Q96PC3 RNU4-57P-201ENST00000515980 135 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 SNORA31.10-201ENST00000516482 106 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 RNU6-856P-201ENST00000516959 98 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.24□□□□□ -2.37
AP1S3Q96PC3 AC087883.1-201ENST00000551882 391 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 AC104984.5-201ENST00000586878 94 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 AL353778.1-201ENST00000603149 408 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
AP1S3Q96PC3 AC092106.3-201ENST00000611308 722 ntBASIC0.24□□□□□ -2.37
AP1S3Q96PC3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.23□□□□□ -2.37
AP1S3Q96PC3 MTND4P14-201ENST00000435799 1354 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 Y_RNA.311-201ENST00000365068 96 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 RNU6-505P-201ENST00000384427 107 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 Y_RNA.578-201ENST00000390903 88 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 RNU1-119P-201ENST00000391122 165 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.23□□□□□ -2.37
AP1S3Q96PC3 RPS25P9-201ENST00000435591 252 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 AC243964.1-201ENST00000441814 261 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.23□□□□□ -2.37
AP1S3Q96PC3 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.23□□□□□ -2.37
AP1S3Q96PC3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
AP1S3Q96PC3 AC007547.1-201ENST00000462177 490 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 AC105758.1-201ENST00000506038 399 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 RNU6-1028P-201ENST00000517164 93 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 MIR544B-201ENST00000582372 78 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 MIR4769-201ENST00000584126 77 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 AC008752.3-201ENST00000588113 712 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.23□□□□□ -2.37
AP1S3Q96PC3 BNIP3P26-201ENST00000600827 554 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 AL031281.1-201ENST00000604049 488 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 AC245297.2-201ENST00000610119 565 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 U6.42-201ENST00000618440 107 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 AC106754.2-201ENST00000623006 233 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 AL163152.1-201ENST00000642001 374 ntBASIC0.23□□□□□ -2.37
AP1S3Q96PC3 RNU6-371P-201ENST00000364283 108 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 RNU6-224P-201ENST00000384055 107 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 SNORA80D-201ENST00000384488 135 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 SNORD41-201ENST00000386967 70 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 AL031577.2-201ENST00000404133 280 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 HIGD1AP15-201ENST00000416198 280 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 MTND4P3-201ENST00000417829 541 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 RPL17P35-201ENST00000432217 549 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 GAPDHP17-201ENST00000449858 1001 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 AC007395.1-201ENST00000451333 677 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.22□□□□□ -2.37
AP1S3Q96PC3 RNU7-21P-201ENST00000459430 62 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 AC022447.4-201ENST00000504053 364 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 AC113410.1-201ENST00000505029 247 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.22□□□□□ -2.37
AP1S3Q96PC3 APOOP3-201ENST00000536787 586 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 MIR548AC-201ENST00000585049 88 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 HMGN1P30-201ENST00000589286 268 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 AL596327.1-201ENST00000603629 213 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 AC064872.1-201ENST00000604823 1072 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 AC116165.2-201ENST00000616705 206 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 AC026585.1-201ENST00000619582 524 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.22□□□□□ -2.37
AP1S3Q96PC3 SNORD3E-202ENST00000627253 216 ntBASIC0.22□□□□□ -2.37
AP1S3Q96PC3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
AP1S3Q96PC3 AC068700.1-201ENST00000565862 3754 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AL442644.1-201ENST00000454390 3105 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
AP1S3Q96PC3 U3.8-201ENST00000363675 217 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 RNU6-298P-201ENST00000390888 96 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 SNORA75.2-201ENST00000391138 150 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 SNORA75.3-201ENST00000391231 150 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AC092423.1-201ENST00000430165 186 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.21□□□□□ -2.38
AP1S3Q96PC3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AC104982.1-201ENST00000478775 574 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AC113347.3-201ENST00000509113 148 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
AP1S3Q96PC3 SNORA68.3-201ENST00000515906 83 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 RNU6-1053P-201ENST00000515930 101 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 RNA5SP134-201ENST00000516492 96 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AC115990.1-201ENST00000526957 301 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AC023050.2-201ENST00000544968 387 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.21□□□□□ -2.38
AP1S3Q96PC3 MTATP6P25-201ENST00000574491 261 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 MTATP6P3-201ENST00000581686 676 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AL390123.1-201ENST00000603216 237 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AL513534.2-201ENST00000603836 250 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AL353149.1-201ENST00000610667 244 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 PCGEM1.1-201ENST00000613431 131 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.21□□□□□ -2.38
AP1S3Q96PC3 AC103706.2-201ENST00000638080 240 ntBASIC0.21□□□□□ -2.38
AP1S3Q96PC3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
AP1S3Q96PC3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms