Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RNU6-1088P-201ENST00000516850 104 ntBASIC1.45□□□□□ -2.18
LINC00477Q96M19 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.45□□□□□ -2.18
LINC00477Q96M19 AC107953.1-201ENST00000522216 297 ntBASIC1.45□□□□□ -2.18
LINC00477Q96M19 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.45□□□□□ -2.18
LINC00477Q96M19 AC007375.1-201ENST00000554513 578 ntBASIC1.45□□□□□ -2.18
LINC00477Q96M19 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.45□□□□□ -2.18
LINC00477Q96M19 AC073410.2-201ENST00000603240 332 ntBASIC1.45□□□□□ -2.18
LINC00477Q96M19 AC080078.2-201ENST00000603766 501 ntBASIC1.45□□□□□ -2.18
LINC00477Q96M19 AL357078.3-201ENST00000607528 618 ntBASIC1.45□□□□□ -2.18
LINC00477Q96M19 AC063943.3-201ENST00000615562 356 ntBASIC1.45□□□□□ -2.18
LINC00477Q96M19 AL136221.1-201ENST00000621449 509 ntBASIC1.45□□□□□ -2.18
LINC00477Q96M19 AL133216.2-202ENST00000634512 349 ntBASIC1.45□□□□□ -2.18
LINC00477Q96M19 MIR3662-201ENST00000637030 95 ntBASIC1.45□□□□□ -2.18
LINC00477Q96M19 AC100810.6-201ENST00000638068 285 ntBASIC1.45□□□□□ -2.18
LINC00477Q96M19 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LINC00477Q96M19 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
LINC00477Q96M19 MTND4P5-201ENST00000435821 1374 ntBASIC1.45□□□□□ -2.18
LINC00477Q96M19 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
LINC00477Q96M19 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
LINC00477Q96M19 AC121333.1-201ENST00000567488 2709 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 AC092881.1-201ENST00000638218 2733 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 RNU6-1317P-201ENST00000364582 104 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 Y_RNA.480-201ENST00000384364 102 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 Y_RNA.481-201ENST00000384373 102 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 MIR487A-201ENST00000385009 80 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 MIR549A-201ENST00000385268 96 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 RNA5SP508-201ENST00000411327 119 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 Z98742.3-201ENST00000418637 326 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 USP9YP28-201ENST00000435142 589 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.44□□□□□ -2.18
LINC00477Q96M19 AL353705.4-201ENST00000449661 238 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 MTND1P11-201ENST00000456661 876 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 RPL38P4-201ENST00000502376 214 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.44□□□□□ -2.18
LINC00477Q96M19 ANXA2P1-201ENST00000505539 926 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 AK3P2-201ENST00000507976 429 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 FAM206BP-201ENST00000510179 541 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 MIR449C-201ENST00000516047 92 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 RNU6-273P-201ENST00000516937 96 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 MTND1P5-201ENST00000517906 940 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 COPS8P3-201ENST00000526024 482 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 CBX3P4-201ENST00000538909 354 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 SCOCP1-201ENST00000554676 349 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 ZNF519P2-201ENST00000557032 169 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.44□□□□□ -2.18
LINC00477Q96M19 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.44□□□□□ -2.18
LINC00477Q96M19 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.44□□□□□ -2.18
LINC00477Q96M19 DISC2.1-201ENST00000612827 205 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
LINC00477Q96M19 uc_338.15-201ENST00000615470 191 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.44□□□□□ -2.18
LINC00477Q96M19 AC005858.4-201ENST00000623191 700 ntBASIC1.44□□□□□ -2.18
LINC00477Q96M19 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.44□□□□□ -2.18
LINC00477Q96M19 AC009487.4-201ENST00000624969 3585 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 RNU4-15P-201ENST00000362613 141 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 SNORD114-19-201ENST00000363072 75 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 RNU6-82P-201ENST00000363970 107 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 RNU6-487P-201ENST00000365430 104 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 RNU6-1329P-201ENST00000365664 107 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 Y_RNA.390-201ENST00000383932 102 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 Y_RNA.453-201ENST00000384223 109 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 MIR95-201ENST00000385072 81 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 MIR450B-201ENST00000401182 78 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.43□□□□□ -2.18
LINC00477Q96M19 MTND3P9-201ENST00000429526 346 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 MTND1P34-201ENST00000438556 671 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 MTND2P29-201ENST00000438595 412 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.43□□□□□ -2.18
LINC00477Q96M19 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.43□□□□□ -2.18
LINC00477Q96M19 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.43□□□□□ -2.18
LINC00477Q96M19 AC096638.1-201ENST00000444678 216 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 RNU7-138P-201ENST00000459479 64 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 PTP4A1P4-201ENST00000512479 322 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.43□□□□□ -2.18
LINC00477Q96M19 RNU6-965P-201ENST00000516721 96 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 HSPE1P18-201ENST00000517602 280 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.43□□□□□ -2.18
LINC00477Q96M19 MTND4LP26-201ENST00000518144 282 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 MRPS36P4-201ENST00000534436 298 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.43□□□□□ -2.18
LINC00477Q96M19 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.43□□□□□ -2.18
LINC00477Q96M19 RNU6-91P-201ENST00000607774 107 ntBASIC1.43□□□□□ -2.18
LINC00477Q96M19 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
LINC00477Q96M19 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 Y_RNA.6-201ENST00000362350 114 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 Y_RNA.9-201ENST00000362354 101 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 RNA5SP276-201ENST00000362580 94 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 Y_RNA.100-201ENST00000363141 102 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 Y_RNA.473-201ENST00000384333 102 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 SNORA8-201ENST00000384574 139 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
LINC00477Q96M19 RNA5SP212-201ENST00000391223 107 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 AC019129.1-201ENST00000403786 261 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 RNU6-325P-201ENST00000411132 105 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.42□□□□□ -2.18
LINC00477Q96M19 AL445685.2-201ENST00000422551 342 ntBASIC1.42□□□□□ -2.18
LINC00477Q96M19 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.42□□□□□ -2.18
LINC00477Q96M19 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.42□□□□□ -2.18
LINC00477Q96M19 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.42□□□□□ -2.18
LINC00477Q96M19 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms