Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM47Q96LD4 Y_RNA.85-201ENST00000363014 111 ntBASIC4.72□□□□□ -1.65
TRIM47Q96LD4 RNU6-72P-201ENST00000384285 79 ntBASIC4.72□□□□□ -1.65
TRIM47Q96LD4 MIR30B-201ENST00000384850 88 ntBASIC4.72□□□□□ -1.65
TRIM47Q96LD4 MIR634-201ENST00000385208 97 ntBASIC4.72□□□□□ -1.65
TRIM47Q96LD4 MIR513A2-201ENST00000385249 127 ntBASIC4.72□□□□□ -1.65
TRIM47Q96LD4 AL078601.1-201ENST00000444542 271 ntBASIC4.72□□□□□ -1.65
TRIM47Q96LD4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM47Q96LD4 RNU1-95P-201ENST00000516357 160 ntBASIC4.72□□□□□ -1.65
TRIM47Q96LD4 RNA5SP395-201ENST00000516567 118 ntBASIC4.72□□□□□ -1.65
TRIM47Q96LD4 RNU1-128P-201ENST00000516704 160 ntBASIC4.72□□□□□ -1.65
TRIM47Q96LD4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM47Q96LD4 MIR4724-201ENST00000579485 89 ntBASIC4.72□□□□□ -1.65
TRIM47Q96LD4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM47Q96LD4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM47Q96LD4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM47Q96LD4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM47Q96LD4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM47Q96LD4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.71□□□□□ -1.65
TRIM47Q96LD4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TRIM47Q96LD4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.71□□□□□ -1.65
TRIM47Q96LD4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM47Q96LD4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM47Q96LD4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM47Q96LD4 SNORD32A-201ENST00000364805 84 ntBASIC4.71□□□□□ -1.66
TRIM47Q96LD4 SNORA5A-201ENST00000384111 134 ntBASIC4.71□□□□□ -1.66
TRIM47Q96LD4 Y_RNA.544-201ENST00000384650 113 ntBASIC4.71□□□□□ -1.66
TRIM47Q96LD4 PTMAP5-201ENST00000393073 333 ntBASIC4.71□□□□□ -1.66
TRIM47Q96LD4 FTH1P6-201ENST00000430768 320 ntBASIC4.71□□□□□ -1.66
TRIM47Q96LD4 AC006011.1-201ENST00000442758 349 ntBASIC4.71□□□□□ -1.66
TRIM47Q96LD4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM47Q96LD4 UBE2CP3-201ENST00000502715 450 ntBASIC4.71□□□□□ -1.66
TRIM47Q96LD4 RNU6-572P-201ENST00000516724 80 ntBASIC4.71□□□□□ -1.66
TRIM47Q96LD4 RNA5SP54-201ENST00000516951 92 ntBASIC4.71□□□□□ -1.66
TRIM47Q96LD4 AC069240.1-201ENST00000548774 375 ntBASIC4.71□□□□□ -1.66
TRIM47Q96LD4 MIR378D2-201ENST00000580636 98 ntBASIC4.71□□□□□ -1.66
TRIM47Q96LD4 RPL30P11-203ENST00000598995 310 ntBASIC4.71□□□□□ -1.66
TRIM47Q96LD4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM47Q96LD4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.71□□□□□ -1.66
TRIM47Q96LD4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
TRIM47Q96LD4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM47Q96LD4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM47Q96LD4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM47Q96LD4 AC087190.4-201ENST00000574616 8334 ntBASIC4.7□□□□□ -1.66
TRIM47Q96LD4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM47Q96LD4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM47Q96LD4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM47Q96LD4 MIR367-201ENST00000362299 68 ntBASIC4.7□□□□□ -1.66
TRIM47Q96LD4 RNA5SP72-201ENST00000364442 117 ntBASIC4.7□□□□□ -1.66
TRIM47Q96LD4 SNORD12C-201ENST00000386307 89 ntBASIC4.7□□□□□ -1.66
TRIM47Q96LD4 RNU6-712P-201ENST00000410558 100 ntBASIC4.7□□□□□ -1.66
TRIM47Q96LD4 RN7SKP177-201ENST00000410567 355 ntBASIC4.7□□□□□ -1.66
TRIM47Q96LD4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM47Q96LD4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM47Q96LD4 snoU13.6-201ENST00000458785 104 ntBASIC4.7□□□□□ -1.66
TRIM47Q96LD4 Y_RNA.690-201ENST00000516603 95 ntBASIC4.7□□□□□ -1.66
TRIM47Q96LD4 MIR5571-201ENST00000577998 113 ntBASIC4.7□□□□□ -1.66
TRIM47Q96LD4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM47Q96LD4 MIR6868-201ENST00000611215 58 ntBASIC4.7□□□□□ -1.66
TRIM47Q96LD4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM47Q96LD4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRIM47Q96LD4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM47Q96LD4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM47Q96LD4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM47Q96LD4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM47Q96LD4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM47Q96LD4 SNORD45.3-201ENST00000363836 72 ntBASIC4.69□□□□□ -1.66
TRIM47Q96LD4 RNU6-793P-201ENST00000384233 104 ntBASIC4.69□□□□□ -1.66
TRIM47Q96LD4 MIR1179-201ENST00000408703 91 ntBASIC4.69□□□□□ -1.66
TRIM47Q96LD4 Y_RNA.622-201ENST00000411091 108 ntBASIC4.69□□□□□ -1.66
TRIM47Q96LD4 RPL23AP95-201ENST00000426806 265 ntBASIC4.69□□□□□ -1.66
TRIM47Q96LD4 RN7SL585P-201ENST00000470538 280 ntBASIC4.69□□□□□ -1.66
TRIM47Q96LD4 AC091179.3-201ENST00000474761 144 ntBASIC4.69□□□□□ -1.66
TRIM47Q96LD4 RN7SL323P-201ENST00000494712 295 ntBASIC4.69□□□□□ -1.66
TRIM47Q96LD4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM47Q96LD4 AC093331.1-201ENST00000521474 169 ntBASIC4.69□□□□□ -1.66
TRIM47Q96LD4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM47Q96LD4 CYCSP30-201ENST00000546447 172 ntBASIC4.69□□□□□ -1.66
TRIM47Q96LD4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM47Q96LD4 MIR4298-201ENST00000584380 73 ntBASIC4.69□□□□□ -1.66
TRIM47Q96LD4 AC027309.3-201ENST00000623419 351 ntBASIC4.69□□□□□ -1.66
TRIM47Q96LD4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM47Q96LD4 Z82217.1-201ENST00000625157 8149 ntBASIC4.69□□□□□ -1.66
TRIM47Q96LD4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM47Q96LD4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
TRIM47Q96LD4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM47Q96LD4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM47Q96LD4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM47Q96LD4 RNU6-508P-201ENST00000363231 103 ntBASIC4.68□□□□□ -1.66
TRIM47Q96LD4 Y_RNA.111-201ENST00000363248 100 ntBASIC4.68□□□□□ -1.66
TRIM47Q96LD4 Y_RNA.244-201ENST00000364484 109 ntBASIC4.68□□□□□ -1.66
TRIM47Q96LD4 RNU6-1296P-201ENST00000383879 107 ntBASIC4.68□□□□□ -1.66
TRIM47Q96LD4 SNORA72-201ENST00000384339 132 ntBASIC4.68□□□□□ -1.66
TRIM47Q96LD4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TRIM47Q96LD4 AL603914.1-201ENST00000401964 204 ntBASIC4.68□□□□□ -1.66
TRIM47Q96LD4 MIR1255A-201ENST00000408338 113 ntBASIC4.68□□□□□ -1.66
TRIM47Q96LD4 RNU6-1245P-201ENST00000411130 106 ntBASIC4.68□□□□□ -1.66
TRIM47Q96LD4 NDUFS5P4-201ENST00000412983 318 ntBASIC4.68□□□□□ -1.66
TRIM47Q96LD4 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.68□□□□□ -1.66
TRIM47Q96LD4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms