Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RNU6-1329P-201ENST00000365664 107 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 RNU6-1013P-201ENST00000384180 107 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 Y_RNA.474-201ENST00000384341 102 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 Y_RNA.529-201ENST00000384586 119 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 MIR29B2-201ENST00000385055 81 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 SNORD73A-201ENST00000386062 65 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 MTND4LP16-201ENST00000440828 295 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 AC013470.1-201ENST00000453438 462 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 snoU13.14-201ENST00000459372 104 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 AL121594.1-201ENST00000475906 575 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 Y_RNA.682-201ENST00000516457 100 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 RNA5SP454-201ENST00000517231 127 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 AC025423.5-201ENST00000550230 219 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 SNRPGP17-201ENST00000603780 214 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 AL132765.2-201ENST00000610812 351 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 Y_RNA.804-201ENST00000615262 101 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 AC063943.3-201ENST00000615562 356 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 AC104985.2-201ENST00000620598 500 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 AC009831.4-201ENST00000620744 325 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 TPTEP1-208ENST00000636884 213 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 ZNF658B-202ENST00000615961 3375 ntBASIC2.23□□□□□ -2.05
PDLIM5Q96HC4 AC080100.1-201ENST00000624239 5356 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 RNU6-128P-201ENST00000383976 107 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 MIR548K-201ENST00000408406 116 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 AL590556.1-201ENST00000423231 483 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 AL590632.1-201ENST00000424289 371 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 AC245102.2-201ENST00000448956 180 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 AC104435.1-201ENST00000483483 166 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 MTCYBP40-201ENST00000509390 1135 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 RNU6-277P-201ENST00000516272 106 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 RNU6-273P-201ENST00000516937 96 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 RNU2-19P-201ENST00000517288 84 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 AC105029.1-201ENST00000520250 669 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 COPS8P3-201ENST00000526024 482 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 NDUFA5P6-201ENST00000542110 379 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 AC026371.1-201ENST00000551867 419 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 uc_338.5-201ENST00000611839 155 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 AC112487.2-201ENST00000637950 304 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 U4.7-201ENST00000638126 106 ntBASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PDLIM5Q96HC4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.21□□□□□ -2.05
PDLIM5Q96HC4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 AL136360.1-201ENST00000503377 1900 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 RNU6-562P-201ENST00000362731 107 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 RNU1-23P-201ENST00000363361 144 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 Y_RNA.510-201ENST00000384511 114 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 RNU6-95P-201ENST00000384697 107 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 MIR144-201ENST00000384886 86 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 AL591034.2-201ENST00000402839 359 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 AC093019.1-201ENST00000443135 252 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 MTND1P17-201ENST00000448961 204 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 AL137159.1-201ENST00000452808 512 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 AC055731.1-201ENST00000474387 401 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 RPL30P12-201ENST00000474666 353 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 MTND5P5-201ENST00000503764 376 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 AP005639.2-201ENST00000527592 928 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 POLR3GP2-201ENST00000588366 668 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 AC243960.4-201ENST00000600532 288 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 AC099654.5-201ENST00000636479 350 ntBASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.21□□□□□ -2.06
PDLIM5Q96HC4 RNU6-1159P-201ENST00000362933 107 ntBASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 RNU6-546P-201ENST00000383991 107 ntBASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 RNU6-214P-201ENST00000384130 107 ntBASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 SNORA48.3-201ENST00000391081 134 ntBASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 AL117339.3-201ENST00000418733 162 ntBASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 UBE2V1P4-201ENST00000425374 344 ntBASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 WARS2P1-201ENST00000429678 537 ntBASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 AL645568.3-201ENST00000433683 316 ntBASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 RPS3AP52-201ENST00000435639 297 ntBASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 RPL39P29-201ENST00000447779 157 ntBASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 MTCO1P29-201ENST00000496868 288 ntBASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 RNA5SP200-201ENST00000516360 103 ntBASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 AC109479.2-201ENST00000517842 174 ntBASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.2□□□□□ -2.06
PDLIM5Q96HC4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms