Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.94□□□□□ -2.1
VMP1Q96GC9 MTCO2P19-201ENST00000427513 598 ntBASIC1.94□□□□□ -2.1
VMP1Q96GC9 AL121601.2-201ENST00000438019 707 ntBASIC1.94□□□□□ -2.1
VMP1Q96GC9 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.94□□□□□ -2.1
VMP1Q96GC9 MTCO2P18-201ENST00000457151 658 ntBASIC1.94□□□□□ -2.1
VMP1Q96GC9 AC104564.1-201ENST00000493028 407 ntBASIC1.94□□□□□ -2.1
VMP1Q96GC9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.94□□□□□ -2.1
VMP1Q96GC9 RNU5F-4P-201ENST00000516581 114 ntBASIC1.94□□□□□ -2.1
VMP1Q96GC9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.94□□□□□ -2.1
VMP1Q96GC9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.94□□□□□ -2.1
VMP1Q96GC9 SUB1P4-201ENST00000566062 339 ntBASIC1.94□□□□□ -2.1
VMP1Q96GC9 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.94□□□□□ -2.1
VMP1Q96GC9 AC119751.7-201ENST00000600494 245 ntBASIC1.94□□□□□ -2.1
VMP1Q96GC9 RPL17P51-201ENST00000605218 238 ntBASIC1.94□□□□□ -2.1
VMP1Q96GC9 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.94□□□□□ -2.1
VMP1Q96GC9 MIR3974-201ENST00000637126 96 ntBASIC1.94□□□□□ -2.1
VMP1Q96GC9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.93□□□□□ -2.1
VMP1Q96GC9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VMP1Q96GC9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.93□□□□□ -2.1
VMP1Q96GC9 SNORA32.2-201ENST00000384049 122 ntBASIC1.93□□□□□ -2.1
VMP1Q96GC9 SNORA67.3-201ENST00000384366 140 ntBASIC1.93□□□□□ -2.1
VMP1Q96GC9 MIR1261-201ENST00000408659 82 ntBASIC1.93□□□□□ -2.1
VMP1Q96GC9 RNU4-26P-201ENST00000410270 107 ntBASIC1.93□□□□□ -2.1
VMP1Q96GC9 AC090960.1-201ENST00000421072 306 ntBASIC1.93□□□□□ -2.1
VMP1Q96GC9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VMP1Q96GC9 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.93□□□□□ -2.1
VMP1Q96GC9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.93□□□□□ -2.1
VMP1Q96GC9 AC112492.4-201ENST00000456549 352 ntBASIC1.93□□□□□ -2.1
VMP1Q96GC9 RNU7-14P-201ENST00000459331 62 ntBASIC1.93□□□□□ -2.1
VMP1Q96GC9 HMGB1P29-201ENST00000505659 499 ntBASIC1.93□□□□□ -2.1
VMP1Q96GC9 ATP5EP1-201ENST00000510257 156 ntBASIC1.93□□□□□ -2.1
VMP1Q96GC9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.93□□□□□ -2.1
VMP1Q96GC9 MIR4285-201ENST00000581001 85 ntBASIC1.93□□□□□ -2.1
VMP1Q96GC9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.93□□□□□ -2.1
VMP1Q96GC9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.93□□□□□ -2.1
VMP1Q96GC9 AC064807.4-201ENST00000607201 407 ntBASIC1.93□□□□□ -2.1
VMP1Q96GC9 AL136221.1-201ENST00000621449 509 ntBASIC1.93□□□□□ -2.1
VMP1Q96GC9 AC097520.1-201ENST00000624435 385 ntBASIC1.93□□□□□ -2.1
VMP1Q96GC9 Y_RNA.1-201ENST00000352915 104 ntBASIC1.92□□□□□ -2.1
VMP1Q96GC9 Y_RNA.553-201ENST00000384670 102 ntBASIC1.92□□□□□ -2.1
VMP1Q96GC9 MIR208B-201ENST00000401172 77 ntBASIC1.92□□□□□ -2.1
VMP1Q96GC9 AC012306.1-201ENST00000423267 114 ntBASIC1.92□□□□□ -2.1
VMP1Q96GC9 AC139712.2-201ENST00000424302 339 ntBASIC1.92□□□□□ -2.1
VMP1Q96GC9 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.92□□□□□ -2.1
VMP1Q96GC9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.92□□□□□ -2.1
VMP1Q96GC9 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.92□□□□□ -2.1
VMP1Q96GC9 HMGN2P23-201ENST00000456759 269 ntBASIC1.92□□□□□ -2.1
VMP1Q96GC9 RNU6-1037P-201ENST00000459571 107 ntBASIC1.92□□□□□ -2.1
VMP1Q96GC9 AC007547.1-201ENST00000462177 490 ntBASIC1.92□□□□□ -2.1
VMP1Q96GC9 AC010486.3-201ENST00000511602 785 ntBASIC1.92□□□□□ -2.1
VMP1Q96GC9 SNORA14.1-201ENST00000516113 141 ntBASIC1.92□□□□□ -2.1
VMP1Q96GC9 RNU6-1098P-201ENST00000516772 96 ntBASIC1.92□□□□□ -2.1
VMP1Q96GC9 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.92□□□□□ -2.1
VMP1Q96GC9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.92□□□□□ -2.1
VMP1Q96GC9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.92□□□□□ -2.1
VMP1Q96GC9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.92□□□□□ -2.1
VMP1Q96GC9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
VMP1Q96GC9 RNU6-661P-201ENST00000362409 107 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 SNORD31B-201ENST00000364977 69 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 SNORA36A-201ENST00000384221 132 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.91□□□□□ -2.1
VMP1Q96GC9 AL445646.1-201ENST00000431784 216 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 AL606489.2-201ENST00000433886 234 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 AL121890.1-201ENST00000435457 205 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.91□□□□□ -2.1
VMP1Q96GC9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.91□□□□□ -2.1
VMP1Q96GC9 TOMM22P6-201ENST00000465035 409 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 AC010409.1-201ENST00000487382 476 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 CCDC34P1-201ENST00000507441 517 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.91□□□□□ -2.1
VMP1Q96GC9 MIR3122-201ENST00000577243 73 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 MIR4424-201ENST00000585257 86 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 AC025811.1-201ENST00000604312 472 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 AC068944.2-201ENST00000610373 403 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 AC005520.5-201ENST00000613926 164 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.91□□□□□ -2.1
VMP1Q96GC9 SNORA43.4-201ENST00000629559 138 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.91□□□□□ -2.1
VMP1Q96GC9 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.91□□□□□ -2.1
VMP1Q96GC9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VMP1Q96GC9 AC009541.1-201ENST00000438279 2662 ntBASIC1.91□□□□□ -2.1
VMP1Q96GC9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
VMP1Q96GC9 SNORD114-1-201ENST00000362705 72 ntBASIC1.9□□□□□ -2.11
VMP1Q96GC9 RNY3P9-201ENST00000384727 106 ntBASIC1.9□□□□□ -2.11
VMP1Q96GC9 SNORD73A-201ENST00000386062 65 ntBASIC1.9□□□□□ -2.11
VMP1Q96GC9 AL079342.1-201ENST00000401460 267 ntBASIC1.9□□□□□ -2.11
VMP1Q96GC9 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.9□□□□□ -2.11
VMP1Q96GC9 AL353193.1-201ENST00000421444 268 ntBASIC1.9□□□□□ -2.11
VMP1Q96GC9 MTCO3P46-201ENST00000425787 232 ntBASIC1.9□□□□□ -2.11
VMP1Q96GC9 MTCO1P19-201ENST00000443487 500 ntBASIC1.9□□□□□ -2.11
VMP1Q96GC9 RPS23P5-201ENST00000495419 428 ntBASIC1.9□□□□□ -2.11
VMP1Q96GC9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.9□□□□□ -2.11
VMP1Q96GC9 AC097473.1-201ENST00000508142 408 ntBASIC1.9□□□□□ -2.11
VMP1Q96GC9 FAM206BP-201ENST00000510179 541 ntBASIC1.9□□□□□ -2.11
VMP1Q96GC9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.9□□□□□ -2.11
VMP1Q96GC9 AC090517.1-201ENST00000569307 266 ntBASIC1.9□□□□□ -2.11
VMP1Q96GC9 VN1R80P-201ENST00000597126 338 ntBASIC1.9□□□□□ -2.11
VMP1Q96GC9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.9□□□□□ -2.11
VMP1Q96GC9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms