Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 EBAG9P1-201ENST00000418955 543 ntBASIC4.19□□□□□ -1.74
IFT43Q96FT9 CR769767.1-201ENST00000436337 346 ntBASIC4.19□□□□□ -1.74
IFT43Q96FT9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.19□□□□□ -1.74
IFT43Q96FT9 Y_RNA.797-201ENST00000515977 94 ntBASIC4.19□□□□□ -1.74
IFT43Q96FT9 RNU6-436P-201ENST00000516171 114 ntBASIC4.19□□□□□ -1.74
IFT43Q96FT9 RNU2-12P-201ENST00000517216 168 ntBASIC4.19□□□□□ -1.74
IFT43Q96FT9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.19□□□□□ -1.74
IFT43Q96FT9 MIR548X2-201ENST00000579776 100 ntBASIC4.19□□□□□ -1.74
IFT43Q96FT9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.19□□□□□ -1.74
IFT43Q96FT9 MIR4286-201ENST00000580651 93 ntBASIC4.19□□□□□ -1.74
IFT43Q96FT9 MIR6867-201ENST00000610636 67 ntBASIC4.19□□□□□ -1.74
IFT43Q96FT9 MIR486-1-201ENST00000612171 68 ntBASIC4.19□□□□□ -1.74
IFT43Q96FT9 MIR6076-201ENST00000617521 113 ntBASIC4.19□□□□□ -1.74
IFT43Q96FT9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.19□□□□□ -1.74
IFT43Q96FT9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.19□□□□□ -1.74
IFT43Q96FT9 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
IFT43Q96FT9 AC100821.1-201ENST00000523153 2479 ntBASIC4.18□□□□□ -1.74
IFT43Q96FT9 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
IFT43Q96FT9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
IFT43Q96FT9 RNU6-529P-201ENST00000363383 104 ntBASIC4.18□□□□□ -1.74
IFT43Q96FT9 Y_RNA.415-201ENST00000384012 112 ntBASIC4.18□□□□□ -1.74
IFT43Q96FT9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
IFT43Q96FT9 AL133475.1-201ENST00000404414 305 ntBASIC4.18□□□□□ -1.74
IFT43Q96FT9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.18□□□□□ -1.74
IFT43Q96FT9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.18□□□□□ -1.74
IFT43Q96FT9 AL441985.1-201ENST00000457727 251 ntBASIC4.18□□□□□ -1.74
IFT43Q96FT9 RPL29P14-201ENST00000495837 428 ntBASIC4.18□□□□□ -1.74
IFT43Q96FT9 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.18□□□□□ -1.74
IFT43Q96FT9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.18□□□□□ -1.74
IFT43Q96FT9 RNU6-107P-201ENST00000516643 102 ntBASIC4.18□□□□□ -1.74
IFT43Q96FT9 RNA5SP143-201ENST00000516936 115 ntBASIC4.18□□□□□ -1.74
IFT43Q96FT9 AC100767.1-201ENST00000528178 123 ntBASIC4.18□□□□□ -1.74
IFT43Q96FT9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.18□□□□□ -1.74
IFT43Q96FT9 MIR1254-2-201ENST00000579553 63 ntBASIC4.18□□□□□ -1.74
IFT43Q96FT9 RPS15AP11-201ENST00000594193 385 ntBASIC4.18□□□□□ -1.74
IFT43Q96FT9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.18□□□□□ -1.74
IFT43Q96FT9 PCGEM1.1-201ENST00000613431 131 ntBASIC4.18□□□□□ -1.74
IFT43Q96FT9 AL078604.3-201ENST00000615580 211 ntBASIC4.18□□□□□ -1.74
IFT43Q96FT9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
IFT43Q96FT9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
IFT43Q96FT9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.18□□□□□ -1.74
IFT43Q96FT9 AL133412.1-201ENST00000380194 2992 ntBASIC4.18□□□□□ -1.74
IFT43Q96FT9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.18□□□□□ -1.74
IFT43Q96FT9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.18□□□□□ -1.74
IFT43Q96FT9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
IFT43Q96FT9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.18□□□□□ -1.74
IFT43Q96FT9 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.18□□□□□ -1.74
IFT43Q96FT9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
IFT43Q96FT9 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
IFT43Q96FT9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
IFT43Q96FT9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
IFT43Q96FT9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.17□□□□□ -1.74
IFT43Q96FT9 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.17□□□□□ -1.74
IFT43Q96FT9 SNORD35B-201ENST00000363660 87 ntBASIC4.17□□□□□ -1.74
IFT43Q96FT9 RNU6-324P-201ENST00000363957 106 ntBASIC4.17□□□□□ -1.74
IFT43Q96FT9 SNORA40-201ENST00000388090 126 ntBASIC4.17□□□□□ -1.74
IFT43Q96FT9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
IFT43Q96FT9 AL117339.2-201ENST00000430475 180 ntBASIC4.17□□□□□ -1.74
IFT43Q96FT9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.17□□□□□ -1.74
IFT43Q96FT9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.17□□□□□ -1.74
IFT43Q96FT9 AC006011.1-201ENST00000442758 349 ntBASIC4.17□□□□□ -1.74
IFT43Q96FT9 RPL21P129-201ENST00000491732 478 ntBASIC4.17□□□□□ -1.74
IFT43Q96FT9 RN7SL604P-201ENST00000492589 296 ntBASIC4.17□□□□□ -1.74
IFT43Q96FT9 RNU7-121P-201ENST00000516604 62 ntBASIC4.17□□□□□ -1.74
IFT43Q96FT9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.17□□□□□ -1.74
IFT43Q96FT9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.17□□□□□ -1.74
IFT43Q96FT9 AC011471.1-201ENST00000585766 187 ntBASIC4.17□□□□□ -1.74
IFT43Q96FT9 AC018692.3-201ENST00000623929 123 ntBASIC4.17□□□□□ -1.74
IFT43Q96FT9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
IFT43Q96FT9 AL161912.2-201ENST00000565707 3007 ntBASIC4.17□□□□□ -1.74
IFT43Q96FT9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
IFT43Q96FT9 AC010332.2-201ENST00000613083 1904 ntBASIC4.17□□□□□ -1.74
IFT43Q96FT9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.17□□□□□ -1.74
IFT43Q96FT9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
IFT43Q96FT9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
IFT43Q96FT9 RNU6-1010P-201ENST00000362757 107 ntBASIC4.16□□□□□ -1.74
IFT43Q96FT9 RNA5SP205-201ENST00000364653 136 ntBASIC4.16□□□□□ -1.74
IFT43Q96FT9 MIR134-201ENST00000385258 73 ntBASIC4.16□□□□□ -1.74
IFT43Q96FT9 RNU6-763P-201ENST00000390865 106 ntBASIC4.16□□□□□ -1.74
IFT43Q96FT9 RNU6-381P-201ENST00000391259 108 ntBASIC4.16□□□□□ -1.74
IFT43Q96FT9 AC245291.1-201ENST00000419501 328 ntBASIC4.16□□□□□ -1.74
IFT43Q96FT9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.16□□□□□ -1.74
IFT43Q96FT9 AL714022.1-201ENST00000439897 151 ntBASIC4.16□□□□□ -1.74
IFT43Q96FT9 RN7SKP164-201ENST00000516138 266 ntBASIC4.16□□□□□ -1.74
IFT43Q96FT9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.16□□□□□ -1.74
IFT43Q96FT9 MIR4431-201ENST00000579990 94 ntBASIC4.16□□□□□ -1.74
IFT43Q96FT9 U7.8-201ENST00000619968 63 ntBASIC4.16□□□□□ -1.74
IFT43Q96FT9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
IFT43Q96FT9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
IFT43Q96FT9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
IFT43Q96FT9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.15□□□□□ -1.74
IFT43Q96FT9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
IFT43Q96FT9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
IFT43Q96FT9 MIR372-201ENST00000362225 67 ntBASIC4.15□□□□□ -1.75
IFT43Q96FT9 SNORA60-201ENST00000362396 134 ntBASIC4.15□□□□□ -1.75
IFT43Q96FT9 RNU6-103P-201ENST00000363686 107 ntBASIC4.15□□□□□ -1.75
IFT43Q96FT9 RNU6-454P-201ENST00000364292 107 ntBASIC4.15□□□□□ -1.75
IFT43Q96FT9 RNA5SP283-201ENST00000365604 119 ntBASIC4.15□□□□□ -1.75
IFT43Q96FT9 SNORA48.7-201ENST00000391302 135 ntBASIC4.15□□□□□ -1.75
IFT43Q96FT9 RNA5SP239-201ENST00000410218 129 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms