Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC068205.3-201ENST00000636385 468 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 RNU6-23P-201ENST00000363283 107 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 Y_RNA.119-201ENST00000363301 96 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 Y_RNA.150-201ENST00000363562 102 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 RNU6-1019P-201ENST00000364424 107 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 RNU6-880P-201ENST00000384526 107 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 SNORA32.3-201ENST00000384772 121 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
TTC28Q96AY4 RNU6-1176P-201ENST00000390955 107 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 RNU2-23P-201ENST00000410545 195 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 AL669831.1-202ENST00000428504 417 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.27□□□□□ -2.37
TTC28Q96AY4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.27□□□□□ -2.37
TTC28Q96AY4 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.27□□□□□ -2.37
TTC28Q96AY4 AC132479.1-201ENST00000449160 144 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 AC087477.1-201ENST00000465747 340 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 COX6CP6-201ENST00000490840 228 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 AC145146.1-201ENST00000496370 254 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 RNY4P37-201ENST00000516225 96 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 RNU6-1261P-201ENST00000517194 104 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 HMGB1P33-201ENST00000563485 527 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 MIR5094-201ENST00000578766 85 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 KATNBL1P5-201ENST00000605015 517 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 AC112220.2-201ENST00000605513 533 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 AC100812.1-201ENST00000607622 580 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 AL590491.3-201ENST00000610731 82 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 AC016911.1-201ENST00000613297 452 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 RNU6-862P-201ENST00000362804 105 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 RNU6-439P-201ENST00000384188 106 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 Y_RNA.543-201ENST00000384649 107 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 MIR19B1-201ENST00000384829 87 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 MIR194-1-201ENST00000384892 85 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 AC027644.1-201ENST00000419595 298 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 MTND1P30-201ENST00000441241 901 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 MTCO2P25-201ENST00000447065 681 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 MTND1P9-201ENST00000453775 944 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 BTF3P15-201ENST00000455606 336 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 AC112492.4-201ENST00000456549 352 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 AC026414.1-201ENST00000504046 698 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 AC093303.1-201ENST00000514549 295 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 SCARNA8-201ENST00000515924 131 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 RNU6-138P-201ENST00000515952 107 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 SCARNA17-201ENST00000516183 144 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.27□□□□□ -2.37
TTC28Q96AY4 AL121992.2-201ENST00000606262 256 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 TUG1_2.1-201ENST00000614234 87 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 AC253576.2-201ENST00000618815 580 ntBASIC0.27□□□□□ -2.37
TTC28Q96AY4 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.27□□□□□ -2.37
TTC28Q96AY4 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
TTC28Q96AY4 RNU6-674P-201ENST00000363831 107 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 Y_RNA.246-201ENST00000364495 108 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 RNU6-701P-201ENST00000384059 107 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 C8orf59P1-201ENST00000429930 303 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.26□□□□□ -2.37
TTC28Q96AY4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.26□□□□□ -2.37
TTC28Q96AY4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.26□□□□□ -2.37
TTC28Q96AY4 MTCO3P18-201ENST00000440206 761 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 HMGB1P30-201ENST00000492455 606 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 AC107982.1-201ENST00000507171 1300 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.26□□□□□ -2.37
TTC28Q96AY4 AC136628.3-201ENST00000521868 290 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 AP001328.1-201ENST00000528550 176 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.26□□□□□ -2.37
TTC28Q96AY4 AC015688.6-201ENST00000577737 104 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 MIR3169-201ENST00000578032 83 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 AL022345.2-201ENST00000606307 135 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 AC073349.3-201ENST00000617616 186 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 AL157770.1-201ENST00000623049 439 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 AC099654.9-201ENST00000637055 678 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 RNU6-226P-201ENST00000363778 107 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 Y_RNA.332-201ENST00000365271 113 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
TTC28Q96AY4 SNORA48.1-201ENST00000390879 135 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 RNU2-64P-201ENST00000411315 191 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 DPRXP1-201ENST00000426312 460 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 MTCO1P27-201ENST00000448269 226 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 ZNF886P-201ENST00000450781 723 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 RNU7-140P-201ENST00000459546 60 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 MED28P2-201ENST00000475771 317 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.26□□□□□ -2.37
TTC28Q96AY4 RNU6-1092P-201ENST00000516955 87 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 RNU6-165P-201ENST00000517170 99 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 AL133153.1-201ENST00000557756 303 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 AC136618.2-201ENST00000575091 400 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 MIR1273C-201ENST00000578669 77 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 MIR4768-201ENST00000585270 74 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 AL592221.1-201ENST00000605266 382 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 AC112220.3-201ENST00000605502 502 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 AC120349.3-201ENST00000624377 529 ntBASIC0.26□□□□□ -2.37
TTC28Q96AY4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
TTC28Q96AY4 SNORD114-19-201ENST00000363072 75 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 SNORD114-28-201ENST00000363610 72 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 RNU6-353P-201ENST00000364266 108 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 RNU6-853P-201ENST00000364306 107 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 RNU6-438P-201ENST00000365561 103 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 Y_RNA.562-201ENST00000384695 113 ntBASIC0.25□□□□□ -2.37
TTC28Q96AY4 RNU4-63P-201ENST00000411313 118 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms