Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS33AQ96AX1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS33AQ96AX1 AC012557.2-201ENST00000605919 418 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 AC009994.1-201ENST00000606889 253 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 U4.5-201ENST00000617137 123 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
VPS33AQ96AX1 Y_RNA.38-201ENST00000362617 102 ntBASIC2.12□□□□□ -2.07
VPS33AQ96AX1 SNORD113-7-201ENST00000363762 77 ntBASIC2.12□□□□□ -2.07
VPS33AQ96AX1 SNORA36A-201ENST00000384221 132 ntBASIC2.12□□□□□ -2.07
VPS33AQ96AX1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.12□□□□□ -2.07
VPS33AQ96AX1 MTCO1P21-201ENST00000416634 589 ntBASIC2.12□□□□□ -2.07
VPS33AQ96AX1 AMD1P1-201ENST00000457220 922 ntBASIC2.12□□□□□ -2.07
VPS33AQ96AX1 RN7SL636P-201ENST00000497504 294 ntBASIC2.12□□□□□ -2.07
VPS33AQ96AX1 AC021146.2-201ENST00000504736 556 ntBASIC2.12□□□□□ -2.07
VPS33AQ96AX1 MIR449C-201ENST00000516047 92 ntBASIC2.12□□□□□ -2.07
VPS33AQ96AX1 RNU6-1332P-201ENST00000516666 104 ntBASIC2.12□□□□□ -2.07
VPS33AQ96AX1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS33AQ96AX1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS33AQ96AX1 AC016957.1-201ENST00000534895 309 ntBASIC2.12□□□□□ -2.07
VPS33AQ96AX1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS33AQ96AX1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS33AQ96AX1 TPRKBP2-201ENST00000565969 475 ntBASIC2.12□□□□□ -2.07
VPS33AQ96AX1 CPDP1-201ENST00000579660 283 ntBASIC2.12□□□□□ -2.07
VPS33AQ96AX1 AC002984.1-201ENST00000591692 448 ntBASIC2.12□□□□□ -2.07
VPS33AQ96AX1 AC005034.5-201ENST00000604219 466 ntBASIC2.12□□□□□ -2.07
VPS33AQ96AX1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS33AQ96AX1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS33AQ96AX1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
VPS33AQ96AX1 RNU6-254P-201ENST00000363377 107 ntBASIC2.11□□□□□ -2.07
VPS33AQ96AX1 RNY4P14-201ENST00000363656 96 ntBASIC2.11□□□□□ -2.07
VPS33AQ96AX1 Y_RNA.332-201ENST00000365271 113 ntBASIC2.11□□□□□ -2.07
VPS33AQ96AX1 RNU6-378P-201ENST00000384324 107 ntBASIC2.11□□□□□ -2.07
VPS33AQ96AX1 Y_RNA.530-201ENST00000384587 101 ntBASIC2.11□□□□□ -2.07
VPS33AQ96AX1 RNU6-160P-201ENST00000384591 107 ntBASIC2.11□□□□□ -2.07
VPS33AQ96AX1 MIR208B-201ENST00000401172 77 ntBASIC2.11□□□□□ -2.07
VPS33AQ96AX1 AL030996.1-201ENST00000411430 235 ntBASIC2.11□□□□□ -2.07
VPS33AQ96AX1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS33AQ96AX1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS33AQ96AX1 MTND3P9-201ENST00000429526 346 ntBASIC2.11□□□□□ -2.07
VPS33AQ96AX1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS33AQ96AX1 FTH1P25-201ENST00000447665 469 ntBASIC2.11□□□□□ -2.07
VPS33AQ96AX1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VPS33AQ96AX1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS33AQ96AX1 MTND1P5-201ENST00000517906 940 ntBASIC2.11□□□□□ -2.07
VPS33AQ96AX1 AC026371.1-201ENST00000551867 419 ntBASIC2.11□□□□□ -2.07
VPS33AQ96AX1 AC104458.1-201ENST00000608243 463 ntBASIC2.11□□□□□ -2.07
VPS33AQ96AX1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.11□□□□□ -2.07
VPS33AQ96AX1 MTND4P1-201ENST00000457501 1466 ntBASIC2.11□□□□□ -2.07
VPS33AQ96AX1 AL365361.1-201ENST00000566942 3481 ntBASIC2.11□□□□□ -2.07
VPS33AQ96AX1 KPNA2P1-201ENST00000458289 1591 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 AC233981.2-201ENST00000611524 1614 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 Y_RNA.3-201ENST00000362331 103 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 Y_RNA.100-201ENST00000363141 102 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 RNU6-933P-201ENST00000384424 107 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 SNORA67.4-201ENST00000384688 142 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
VPS33AQ96AX1 Y_RNA.615-201ENST00000410769 117 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 RNU6-325P-201ENST00000411132 105 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 RNU6-373P-201ENST00000411247 98 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS33AQ96AX1 AL589823.1-201ENST00000429577 183 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 HMGN2P3-201ENST00000433603 273 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 AL645568.3-201ENST00000433683 316 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 HMGN2P5-201ENST00000436882 273 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 HMGN2P18-201ENST00000450680 270 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS33AQ96AX1 MIR514B-201ENST00000516774 80 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 AC087441.2-201ENST00000529141 262 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS33AQ96AX1 CYP2C61P-201ENST00000604072 290 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 AL022345.1-201ENST00000607292 135 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 MIR8076-201ENST00000611401 83 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 AC009831.4-201ENST00000620744 325 ntBASIC2.1□□□□□ -2.07
VPS33AQ96AX1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS33AQ96AX1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.1□□□□□ -2.07
VPS33AQ96AX1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS33AQ96AX1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VPS33AQ96AX1 RNA5SP276-201ENST00000362580 94 ntBASIC2.09□□□□□ -2.07
VPS33AQ96AX1 RNU6-1090P-201ENST00000364065 94 ntBASIC2.09□□□□□ -2.07
VPS33AQ96AX1 Y_RNA.373-201ENST00000365600 103 ntBASIC2.09□□□□□ -2.07
VPS33AQ96AX1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
VPS33AQ96AX1 RNU6-1286P-201ENST00000383871 107 ntBASIC2.09□□□□□ -2.07
VPS33AQ96AX1 MIR221-201ENST00000385135 110 ntBASIC2.09□□□□□ -2.07
VPS33AQ96AX1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
VPS33AQ96AX1 RNU11-3P-201ENST00000391111 133 ntBASIC2.09□□□□□ -2.07
VPS33AQ96AX1 RPS26P42-201ENST00000413485 326 ntBASIC2.09□□□□□ -2.07
VPS33AQ96AX1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
VPS33AQ96AX1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS33AQ96AX1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.09□□□□□ -2.07
VPS33AQ96AX1 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
VPS33AQ96AX1 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
VPS33AQ96AX1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS33AQ96AX1 MIR5002-201ENST00000584713 97 ntBASIC2.09□□□□□ -2.07
VPS33AQ96AX1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS33AQ96AX1 AL627230.6-201ENST00000611129 280 ntBASIC2.09□□□□□ -2.07
VPS33AQ96AX1 U1.36-201ENST00000620684 176 ntBASIC2.09□□□□□ -2.07
VPS33AQ96AX1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.09□□□□□ -2.07
VPS33AQ96AX1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
VPS33AQ96AX1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
VPS33AQ96AX1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms