Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AL355596.1-201ENST00000565399 3996 ntBASIC2.54□□□□□ -2
RAB40AQ8WXH6 MIR22-201ENST00000362190 85 ntBASIC2.54□□□□□ -2
RAB40AQ8WXH6 RNU4-15P-201ENST00000362613 141 ntBASIC2.54□□□□□ -2
RAB40AQ8WXH6 RNA5SP125-201ENST00000364843 120 ntBASIC2.54□□□□□ -2
RAB40AQ8WXH6 Y_RNA.509-201ENST00000384506 99 ntBASIC2.54□□□□□ -2
RAB40AQ8WXH6 SNORD67-201ENST00000390833 111 ntBASIC2.54□□□□□ -2
RAB40AQ8WXH6 MIR208B-201ENST00000401172 77 ntBASIC2.54□□□□□ -2
RAB40AQ8WXH6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.54□□□□□ -2
RAB40AQ8WXH6 AC003685.2-201ENST00000422795 395 ntBASIC2.54□□□□□ -2
RAB40AQ8WXH6 AC022018.1-201ENST00000430685 241 ntBASIC2.54□□□□□ -2
RAB40AQ8WXH6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.54□□□□□ -2
RAB40AQ8WXH6 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.54□□□□□ -2
RAB40AQ8WXH6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.54□□□□□ -2
RAB40AQ8WXH6 snoU13.6-201ENST00000458785 104 ntBASIC2.54□□□□□ -2
RAB40AQ8WXH6 AC008549.1-201ENST00000512900 643 ntBASIC2.54□□□□□ -2
RAB40AQ8WXH6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.54□□□□□ -2
RAB40AQ8WXH6 AC109329.2-201ENST00000519658 482 ntBASIC2.54□□□□□ -2
RAB40AQ8WXH6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.54□□□□□ -2
RAB40AQ8WXH6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.54□□□□□ -2
RAB40AQ8WXH6 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.54□□□□□ -2
RAB40AQ8WXH6 AC023824.2-201ENST00000566185 400 ntBASIC2.54□□□□□ -2
RAB40AQ8WXH6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.54□□□□□ -2
RAB40AQ8WXH6 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.54□□□□□ -2
RAB40AQ8WXH6 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.54□□□□□ -2
RAB40AQ8WXH6 AC137590.2-201ENST00000619709 240 ntBASIC2.54□□□□□ -2
RAB40AQ8WXH6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.54□□□□□ -2
RAB40AQ8WXH6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.53□□□□□ -2
RAB40AQ8WXH6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RAB40AQ8WXH6 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RAB40AQ8WXH6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.53□□□□□ -2
RAB40AQ8WXH6 RNU6-595P-201ENST00000363944 107 ntBASIC2.53□□□□□ -2
RAB40AQ8WXH6 RNU6-1274P-201ENST00000384557 107 ntBASIC2.53□□□□□ -2
RAB40AQ8WXH6 MIR512-1-201ENST00000384913 84 ntBASIC2.53□□□□□ -2
RAB40AQ8WXH6 MIR592-201ENST00000384959 97 ntBASIC2.53□□□□□ -2
RAB40AQ8WXH6 SNORA75.6-201ENST00000391318 127 ntBASIC2.53□□□□□ -2
RAB40AQ8WXH6 AL353997.1-201ENST00000432936 108 ntBASIC2.53□□□□□ -2
RAB40AQ8WXH6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.53□□□□□ -2
RAB40AQ8WXH6 MTCO3P10-201ENST00000455912 772 ntBASIC2.53□□□□□ -2
RAB40AQ8WXH6 AC090096.1-201ENST00000489168 390 ntBASIC2.53□□□□□ -2
RAB40AQ8WXH6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.53□□□□□ -2
RAB40AQ8WXH6 AL590705.4-201ENST00000532209 134 ntBASIC2.53□□□□□ -2
RAB40AQ8WXH6 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.53□□□□□ -2
RAB40AQ8WXH6 AL355297.2-201ENST00000604792 129 ntBASIC2.53□□□□□ -2
RAB40AQ8WXH6 AC093732.2-201ENST00000607950 274 ntBASIC2.53□□□□□ -2
RAB40AQ8WXH6 AC092608.2-201ENST00000624427 218 ntBASIC2.53□□□□□ -2
RAB40AQ8WXH6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.53□□□□□ -2
RAB40AQ8WXH6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2
RAB40AQ8WXH6 AC009487.2-201ENST00000420969 6821 ntBASIC2.53□□□□□ -2
RAB40AQ8WXH6 AL161431.1-201ENST00000618966 4205 ntBASIC2.53□□□□□ -2
RAB40AQ8WXH6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.53□□□□□ -2.01
RAB40AQ8WXH6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 RNU6-1159P-201ENST00000362933 107 ntBASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 RNU6-890P-201ENST00000384121 107 ntBASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 SNORA41-201ENST00000384675 132 ntBASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 MIR181A2-201ENST00000384863 110 ntBASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 SNORA46.1-201ENST00000391069 153 ntBASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 MTCYBP2-201ENST00000407745 171 ntBASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 AC011816.1-201ENST00000441346 546 ntBASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 RN7SKP210-201ENST00000459176 261 ntBASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 RPPH1-2P-201ENST00000516688 293 ntBASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 MIR3605-201ENST00000583214 100 ntBASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 AC005014.2-201ENST00000607795 599 ntBASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RAB40AQ8WXH6 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 RNY1P16-201ENST00000363063 111 ntBASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 MIR95-201ENST00000385072 81 ntBASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 RNA5SP201-201ENST00000410316 124 ntBASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 Y_RNA.597-201ENST00000410463 100 ntBASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 Z82188.1-201ENST00000436709 154 ntBASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 ELOCP24-201ENST00000456370 334 ntBASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 snoU13.30-201ENST00000458951 104 ntBASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 RNU7-26P-201ENST00000458980 63 ntBASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 SNORA48.11-201ENST00000517015 89 ntBASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 PCGEM1.1-201ENST00000613431 131 ntBASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 AC005520.5-201ENST00000613926 164 ntBASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
RAB40AQ8WXH6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms