Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 SNORA36A-201ENST00000384221 132 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 RNU6-550P-201ENST00000391057 101 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 RNU6-1245P-201ENST00000411130 106 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 HIGD1AP15-201ENST00000416198 280 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 AC073910.1-201ENST00000445047 438 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 MTCYBP1-201ENST00000454315 1119 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 AC007547.1-201ENST00000462177 490 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 AL163973.1-201ENST00000484753 577 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 AC079140.3-201ENST00000511111 550 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 RNU6-1178P-201ENST00000516674 107 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 RNU2-46P-201ENST00000517038 113 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 HSPE1P4-201ENST00000550617 308 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 AC009977.1-201ENST00000586015 570 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 AL391646.1-201ENST00000603860 190 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 AL359999.1-201ENST00000604513 294 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 AC069114.2-201ENST00000604699 304 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 AL022345.2-201ENST00000606307 135 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 AC126177.8-201ENST00000618339 1015 ntBASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.66□□□□□ -2.3
MBD3L1Q8WWY6 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 U3.4-201ENST00000363352 213 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 RNU1-96P-201ENST00000364163 162 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 RNU5E-5P-201ENST00000365379 116 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 SNORA20.2-201ENST00000383922 131 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 RNU6-418P-201ENST00000384035 107 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 MTCO2P8-201ENST00000412213 658 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 ARL5AP1-201ENST00000418991 388 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 AC060773.1-201ENST00000421698 310 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 AC009474.2-201ENST00000451383 136 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 AL162395.1-201ENST00000457882 422 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 AC016925.1-201ENST00000458303 298 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 AC098799.1-201ENST00000504752 800 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 AC091435.1-201ENST00000505442 584 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 AC104136.1-201ENST00000512969 394 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 Y_RNA.672-201ENST00000516289 104 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 RNU5F-4P-201ENST00000516581 114 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 RNA5SP384-201ENST00000516615 116 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 AC090572.1-201ENST00000519251 160 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 CYCSP23-201ENST00000519781 313 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 AC023050.3-201ENST00000541142 333 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 MIR3923-201ENST00000579521 83 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 MIR4653-201ENST00000585107 83 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 BNIP3P8-201ENST00000597863 560 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 AL021879.1-201ENST00000611756 288 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 AL078595.3-201ENST00000623815 1166 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 AP000720.1-201ENST00000625091 483 ntBASIC0.65□□□□□ -2.31
MBD3L1Q8WWY6 RNU6-500P-201ENST00000362349 107 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 RNU6-545P-201ENST00000362681 104 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 U3.9-201ENST00000363823 204 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 RNU6-877P-201ENST00000383868 107 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 AC004965.1-201ENST00000413033 213 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 EBAG9P1-201ENST00000418955 543 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 AC098592.1-201ENST00000419352 333 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 AC078809.1-201ENST00000427601 140 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 SNAP23P1-201ENST00000433229 246 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 AC132479.1-201ENST00000449160 144 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 RPS27P1-201ENST00000450552 247 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 HSPE1P13-201ENST00000451143 297 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 AC013470.1-201ENST00000453438 462 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 PSMC1P5-201ENST00000512850 177 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 AC022878.1-201ENST00000530684 149 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 AL442163.3-201ENST00000554110 156 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 BNIP3P16-201ENST00000589779 534 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 AC008751.2-201ENST00000597885 980 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 AC112191.3-201ENST00000604371 277 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 FAM71BP1-201ENST00000604431 523 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 AL133173.2-201ENST00000614270 90 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 AC008147.4-201ENST00000617570 1204 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 AC006927.3-201ENST00000638789 384 ntBASIC0.64□□□□□ -2.31
MBD3L1Q8WWY6 AC008163.1-202ENST00000636004 2889 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 MTND4P14-201ENST00000435799 1354 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 SNORA33-201ENST00000363664 130 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 U8.10-201ENST00000384260 133 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 MIR532-201ENST00000385025 91 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 RNU6-387P-201ENST00000411331 105 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 USP9YP14-201ENST00000430663 563 ntBASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.63□□□□□ -2.31
MBD3L1Q8WWY6 TAF9P1-201ENST00000445421 515 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms