Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AMD1P1-201ENST00000457220 922 ntBASIC2.04□□□□□ -2.08
CKAP2Q8WWK9 RPL9P9-202ENST00000466501 579 ntBASIC2.04□□□□□ -2.08
CKAP2Q8WWK9 TRBV12-1-201ENST00000479785 344 ntBASIC2.04□□□□□ -2.08
CKAP2Q8WWK9 AC092436.3-201ENST00000511788 257 ntBASIC2.04□□□□□ -2.08
CKAP2Q8WWK9 Y_RNA.655-201ENST00000515919 96 ntBASIC2.04□□□□□ -2.08
CKAP2Q8WWK9 MIR449C-201ENST00000516047 92 ntBASIC2.04□□□□□ -2.08
CKAP2Q8WWK9 Y_RNA.665-201ENST00000516177 98 ntBASIC2.04□□□□□ -2.08
CKAP2Q8WWK9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.04□□□□□ -2.08
CKAP2Q8WWK9 AC091544.4-201ENST00000555268 342 ntBASIC2.04□□□□□ -2.08
CKAP2Q8WWK9 AC078795.3-201ENST00000602913 472 ntBASIC2.04□□□□□ -2.08
CKAP2Q8WWK9 AL162373.1-201ENST00000620433 407 ntBASIC2.04□□□□□ -2.08
CKAP2Q8WWK9 AC098657.3-201ENST00000620434 263 ntBASIC2.04□□□□□ -2.08
CKAP2Q8WWK9 AC064859.1-201ENST00000624741 174 ntBASIC2.04□□□□□ -2.08
CKAP2Q8WWK9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.04□□□□□ -2.08
CKAP2Q8WWK9 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 Y_RNA.9-201ENST00000362354 101 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 RNU6-1159P-201ENST00000362933 107 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 RNU6-1252P-201ENST00000363054 104 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 RNU4-12P-201ENST00000365233 139 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 MIR1262-201ENST00000408276 93 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 U3.40-201ENST00000408706 208 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 RN7SL429P-201ENST00000479090 223 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 RN7SL489P-201ENST00000486185 223 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 RN7SL327P-201ENST00000488659 223 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 AC104564.1-201ENST00000493028 407 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 RNA5SP281-201ENST00000516504 135 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 TPRKBP2-201ENST00000565969 475 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 AC109446.1-201ENST00000566172 220 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 MIR3923-201ENST00000579521 83 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 AL078605.1-201ENST00000603529 500 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 RN7SL853P-201ENST00000617250 223 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CKAP2Q8WWK9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.09
CKAP2Q8WWK9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 Y_RNA.256-201ENST00000364594 104 ntBASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 RNU6-1215P-201ENST00000384441 102 ntBASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 RNU6-332P-201ENST00000391193 108 ntBASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 AL512604.1-201ENST00000404812 257 ntBASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 U8.21-201ENST00000459536 136 ntBASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 PTP4A1P4-201ENST00000512479 322 ntBASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 AC025465.4-201ENST00000513422 638 ntBASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 RNU6-991P-201ENST00000516168 107 ntBASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 MIR514B-201ENST00000516774 80 ntBASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 MIR4298-201ENST00000584380 73 ntBASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 AL109918.3-201ENST00000603072 338 ntBASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 CTHRC1P1-201ENST00000605383 469 ntBASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 FAM157A-202ENST00000615155 405 ntBASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 SNORA43.4-201ENST00000629559 138 ntBASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.02□□□□□ -2.09
CKAP2Q8WWK9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 RNU6-227P-201ENST00000362865 103 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 RNU6-254P-201ENST00000363377 107 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 MIR518A2-201ENST00000384966 87 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 SNORA26.3-201ENST00000391119 136 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 MTCYBP2-201ENST00000407745 171 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 RNU2-40P-201ENST00000410833 196 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 AL135786.1-201ENST00000415892 214 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 AC027124.2-201ENST00000428249 105 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 HMGN2P26-201ENST00000463169 339 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 AC091435.1-201ENST00000505442 584 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 ANXA2P1-201ENST00000505539 926 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 SCOCP1-201ENST00000554676 349 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 ZNF519P2-201ENST00000557032 169 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 AC021231.3-201ENST00000558497 370 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 Z98751.3-201ENST00000604447 521 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 AC104458.1-201ENST00000608243 463 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 AL450472.1-202ENST00000637286 180 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 AC024614.3-201ENST00000637860 256 ntBASIC2.01□□□□□ -2.09
CKAP2Q8WWK9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CKAP2Q8WWK9 RNY4P14-201ENST00000363656 96 ntBASIC2□□□□□ -2.09
CKAP2Q8WWK9 SNORD32B-201ENST00000364460 84 ntBASIC2□□□□□ -2.09
CKAP2Q8WWK9 RNU6-378P-201ENST00000384324 107 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms