Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RNU6-873P-201ENST00000363833 107 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 Y_RNA.416-201ENST00000384014 113 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HIPK4Q8NE63 SNORA57.1-201ENST00000391227 145 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 Y_RNA.602-201ENST00000410535 92 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.31□□□□□ -1.88
HIPK4Q8NE63 AC017079.2-201ENST00000416102 485 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.31□□□□□ -1.88
HIPK4Q8NE63 AC007215.1-201ENST00000464893 276 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 AC021205.2-201ENST00000480069 347 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 HMGB1P35-201ENST00000503360 598 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 SNORA31.6-201ENST00000516241 130 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 RNU6-111P-201ENST00000517179 105 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 AC105137.2-201ENST00000569073 466 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 MIR5685-201ENST00000579080 79 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 MIR3136-201ENST00000583498 78 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 AC012493.2-201ENST00000595083 291 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 AL020997.2-201ENST00000602607 184 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 AL133393.1-201ENST00000603277 287 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 AC073657.2-201ENST00000605661 303 ntBASIC3.31□□□□□ -1.88
HIPK4Q8NE63 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.3□□□□□ -1.88
HIPK4Q8NE63 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HIPK4Q8NE63 MFSD8-233ENST00000641482 4860 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 RNU6-799P-201ENST00000363567 107 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HIPK4Q8NE63 Y_RNA.539-201ENST00000384635 107 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 MIR147B-201ENST00000390185 80 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 MIR548H3-201ENST00000408771 118 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 RN7SKP156-201ENST00000410308 342 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.3□□□□□ -1.88
HIPK4Q8NE63 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.3□□□□□ -1.88
HIPK4Q8NE63 HSPE1P25-201ENST00000455484 251 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 snoU13.14-201ENST00000459372 104 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 AP001324.2-201ENST00000461163 319 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 RNU6-567P-201ENST00000516746 107 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 RNA5SP54-201ENST00000516951 92 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.3□□□□□ -1.88
HIPK4Q8NE63 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.3□□□□□ -1.88
HIPK4Q8NE63 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.3□□□□□ -1.88
HIPK4Q8NE63 CYP4A27P-201ENST00000567218 190 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 MIR4423-201ENST00000580922 80 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 MIR6798-201ENST00000612887 67 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 AC005520.5-201ENST00000613926 164 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 AL357075.2-201ENST00000614906 189 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.3□□□□□ -1.88
HIPK4Q8NE63 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HIPK4Q8NE63 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIPK4Q8NE63 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HIPK4Q8NE63 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIPK4Q8NE63 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
HIPK4Q8NE63 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIPK4Q8NE63 RNA5SP479-201ENST00000364858 117 ntBASIC3.29□□□□□ -1.88
HIPK4Q8NE63 Y_RNA.462-201ENST00000384268 102 ntBASIC3.29□□□□□ -1.88
HIPK4Q8NE63 MIR549A-201ENST00000385268 96 ntBASIC3.29□□□□□ -1.88
HIPK4Q8NE63 AC009310.1-201ENST00000414414 451 ntBASIC3.29□□□□□ -1.88
HIPK4Q8NE63 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.29□□□□□ -1.88
HIPK4Q8NE63 AC138623.1-201ENST00000418060 216 ntBASIC3.29□□□□□ -1.88
HIPK4Q8NE63 AIMP1P2-201ENST00000425294 312 ntBASIC3.29□□□□□ -1.88
HIPK4Q8NE63 AC112220.1-201ENST00000434628 355 ntBASIC3.29□□□□□ -1.88
HIPK4Q8NE63 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.29□□□□□ -1.88
HIPK4Q8NE63 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.29□□□□□ -1.88
HIPK4Q8NE63 AL441985.1-201ENST00000457727 251 ntBASIC3.29□□□□□ -1.88
HIPK4Q8NE63 RPL23AP67-201ENST00000465341 474 ntBASIC3.29□□□□□ -1.88
HIPK4Q8NE63 GZMAP1-201ENST00000503054 631 ntBASIC3.29□□□□□ -1.88
HIPK4Q8NE63 HMGB3P17-201ENST00000504195 649 ntBASIC3.29□□□□□ -1.88
HIPK4Q8NE63 AC026402.1-201ENST00000513642 170 ntBASIC3.29□□□□□ -1.88
HIPK4Q8NE63 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.29□□□□□ -1.88
HIPK4Q8NE63 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.29□□□□□ -1.88
HIPK4Q8NE63 RN7SL703P-201ENST00000578485 302 ntBASIC3.29□□□□□ -1.88
HIPK4Q8NE63 AL034555.1-201ENST00000604816 211 ntBASIC3.29□□□□□ -1.88
HIPK4Q8NE63 AC011373.1-201ENST00000607270 237 ntBASIC3.29□□□□□ -1.88
HIPK4Q8NE63 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.29□□□□□ -1.88
HIPK4Q8NE63 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.29□□□□□ -1.88
HIPK4Q8NE63 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIPK4Q8NE63 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HIPK4Q8NE63 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HIPK4Q8NE63 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HIPK4Q8NE63 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HIPK4Q8NE63 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HIPK4Q8NE63 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.28□□□□□ -1.88
HIPK4Q8NE63 RNU6-961P-201ENST00000363893 105 ntBASIC3.28□□□□□ -1.88
HIPK4Q8NE63 SNORD27-201ENST00000363981 72 ntBASIC3.28□□□□□ -1.88
HIPK4Q8NE63 RNU6-280P-201ENST00000364145 104 ntBASIC3.28□□□□□ -1.88
HIPK4Q8NE63 SNORA14A-201ENST00000364773 135 ntBASIC3.28□□□□□ -1.88
HIPK4Q8NE63 U3.26-201ENST00000391236 204 ntBASIC3.28□□□□□ -1.88
HIPK4Q8NE63 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.28□□□□□ -1.88
HIPK4Q8NE63 AC010095.1-201ENST00000443543 144 ntBASIC3.28□□□□□ -1.88
HIPK4Q8NE63 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.28□□□□□ -1.88
HIPK4Q8NE63 SNORA40.9-201ENST00000515895 93 ntBASIC3.28□□□□□ -1.88
HIPK4Q8NE63 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.28□□□□□ -1.88
HIPK4Q8NE63 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.28□□□□□ -1.88
HIPK4Q8NE63 U4.6-201ENST00000621618 127 ntBASIC3.28□□□□□ -1.88
HIPK4Q8NE63 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.28□□□□□ -1.88
HIPK4Q8NE63 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.28□□□□□ -1.88
HIPK4Q8NE63 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
HIPK4Q8NE63 MAPK10-322ENST00000641485 4530 ntBASIC3.28□□□□□ -1.88
HIPK4Q8NE63 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.89
HIPK4Q8NE63 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
HIPK4Q8NE63 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms