Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 AC020895.1-201ENST00000595362 272 ntBASIC3.28□□□□□ -1.88
RNF169Q8NCN4 MTND4LP5-201ENST00000605152 292 ntBASIC3.28□□□□□ -1.88
RNF169Q8NCN4 RPL23AP88-201ENST00000605759 454 ntBASIC3.28□□□□□ -1.88
RNF169Q8NCN4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.28□□□□□ -1.88
RNF169Q8NCN4 AC068831.7-201ENST00000616954 363 ntBASIC3.28□□□□□ -1.88
RNF169Q8NCN4 AC097372.5-201ENST00000623665 376 ntBASIC3.28□□□□□ -1.88
RNF169Q8NCN4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.28□□□□□ -1.88
RNF169Q8NCN4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF169Q8NCN4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF169Q8NCN4 AC009541.1-201ENST00000438279 2662 ntBASIC3.28□□□□□ -1.88
RNF169Q8NCN4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
RNF169Q8NCN4 AL355596.1-201ENST00000565399 3996 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 AC110491.1-201ENST00000562191 2010 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
RNF169Q8NCN4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.27□□□□□ -1.89
RNF169Q8NCN4 AC233981.2-201ENST00000611524 1614 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 RNU6-770P-201ENST00000363929 105 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 Y_RNA.288-201ENST00000364854 92 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 Y_RNA.461-201ENST00000384263 103 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 RNY3P4-201ENST00000384428 101 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 RPL21P75-201ENST00000396599 483 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 RPL21P28-201ENST00000401418 483 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 FTH1P15-201ENST00000406984 280 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 RNU6-130P-201ENST00000411112 103 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 AL590556.1-201ENST00000423231 483 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 RPL26P9-201ENST00000457466 433 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 snoU13.30-201ENST00000458951 104 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 RPL21P39-201ENST00000463605 483 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 AC117440.1-201ENST00000474107 571 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 RPL30P14-201ENST00000482744 348 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 AC087190.1-201ENST00000484462 480 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 AC107032.1-201ENST00000485945 480 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 MRPL42P6-201ENST00000486397 371 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 AC132942.1-201ENST00000486753 483 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 AC093591.1-201ENST00000491435 481 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 RPL21P16-201ENST00000495531 483 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 ANXA2P1-201ENST00000505539 926 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 AC067942.3-201ENST00000512025 362 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RNF169Q8NCN4 AP002770.2-201ENST00000543613 532 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 GTF3AP2-201ENST00000557014 266 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.27□□□□□ -1.89
RNF169Q8NCN4 MIR4506-201ENST00000584693 77 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 AC010928.2-201ENST00000588017 287 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 HSPE1P7-201ENST00000604681 321 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 AC024581.2-201ENST00000619986 252 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 AC130454.1-201ENST00000622948 401 ntBASIC3.27□□□□□ -1.89
RNF169Q8NCN4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
RNF169Q8NCN4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RNF169Q8NCN4 Z75746.1-201ENST00000440243 2080 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 FAM35CP-201ENST00000554755 2470 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RNF169Q8NCN4 Y_RNA.26-201ENST00000362539 101 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 SNORD56.3-201ENST00000363507 71 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 RNU6-379P-201ENST00000363813 104 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 Y_RNA.183-201ENST00000363882 113 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 Y_RNA.222-201ENST00000364264 102 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 U3.13-201ENST00000364804 214 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 RNU6-968P-201ENST00000384076 107 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 RNU6-708P-201ENST00000384217 107 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 RNU6-17P-201ENST00000384245 107 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 Y_RNA.471-201ENST00000384312 102 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 RNU6-18P-201ENST00000384527 107 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 MT-TW-201ENST00000387382 68 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF169Q8NCN4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF169Q8NCN4 AC074117.2-201ENST00000417130 397 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 SDAD1P3-201ENST00000427380 333 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 Z82188.1-201ENST00000436709 154 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.26□□□□□ -1.89
RNF169Q8NCN4 RPS29P20-201ENST00000489592 171 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 RPL23AP75-201ENST00000491601 451 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 AC104564.1-201ENST00000493028 407 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 AC091826.1-201ENST00000514065 313 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 SNORA40.15-201ENST00000516884 107 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 MRPS36P4-201ENST00000534436 298 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.26□□□□□ -1.89
RNF169Q8NCN4 MIR4474-201ENST00000579189 78 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 MIR4513-201ENST00000581077 86 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 AC006023.1-201ENST00000603944 259 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 AC004832.5-201ENST00000608677 401 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 SNORA43.4-201ENST00000629559 138 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 HAUS6P2-201ENST00000433254 2404 ntBASIC3.26□□□□□ -1.89
RNF169Q8NCN4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.26□□□□□ -1.89
RNF169Q8NCN4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF169Q8NCN4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RNF169Q8NCN4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF169Q8NCN4 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.25□□□□□ -1.89
RNF169Q8NCN4 OR56A5-201ENST00000340110 738 ntBASIC3.25□□□□□ -1.89
RNF169Q8NCN4 RNU6-487P-201ENST00000365430 104 ntBASIC3.25□□□□□ -1.89
RNF169Q8NCN4 Y_RNA.358-201ENST00000365491 99 ntBASIC3.25□□□□□ -1.89
RNF169Q8NCN4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF169Q8NCN4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF169Q8NCN4 RNU6-1245P-201ENST00000411130 106 ntBASIC3.25□□□□□ -1.89
RNF169Q8NCN4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.25□□□□□ -1.89
RNF169Q8NCN4 USP9YP16-201ENST00000430287 407 ntBASIC3.25□□□□□ -1.89
RNF169Q8NCN4 AL139132.1-201ENST00000431587 344 ntBASIC3.25□□□□□ -1.89
RNF169Q8NCN4 RPS12P18-201ENST00000442381 270 ntBASIC3.25□□□□□ -1.89
RNF169Q8NCN4 AL590664.1-201ENST00000448065 339 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms