Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 RPL21P16-201ENST00000495531 483 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 MIR3162-201ENST00000581818 82 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 CYP2C61P-201ENST00000604072 290 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 AC008121.3-201ENST00000618726 433 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 SCARNA4-201ENST00000629045 128 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 MTND5P10-201ENST00000603719 1809 ntBASIC3.34□□□□□ -1.87
PRPF38AQ8NAV1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PRPF38AQ8NAV1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 RNU6-1159P-201ENST00000362933 107 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 Y_RNA.146-201ENST00000363549 102 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 Y_RNA.187-201ENST00000363918 113 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 RNA5SP240-201ENST00000365355 128 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 SNORA29-201ENST00000384183 140 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 Y_RNA.535-201ENST00000384612 99 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 MTCYBP2-201ENST00000407745 171 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 RNA5SP494-201ENST00000410653 129 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 RNA5SP492-201ENST00000411330 114 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 AC012306.1-201ENST00000423267 114 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 RNU7-152P-201ENST00000458982 64 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 AC090096.1-201ENST00000489168 390 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 CKS1BP2-201ENST00000497342 240 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 HSPE1P20-201ENST00000538133 289 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 CYP4A27P-201ENST00000567218 190 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
PRPF38AQ8NAV1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 RNU6-595P-201ENST00000363944 107 ntBASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 Y_RNA.533-201ENST00000384596 114 ntBASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 RNU2-63P-201ENST00000410792 194 ntBASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 RNA5SP184-201ENST00000411071 108 ntBASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 AC243428.1-201ENST00000421099 264 ntBASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 HMGN1P13-201ENST00000505795 138 ntBASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 RNU6-1170P-201ENST00000515974 106 ntBASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 SCARNA16.2-201ENST00000516520 172 ntBASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 RNU6-1213P-201ENST00000517075 94 ntBASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 Z98751.3-201ENST00000604447 521 ntBASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 AL133255.1-201ENST00000606374 441 ntBASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 MIR6733-201ENST00000635723 61 ntBASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.32□□□□□ -1.88
PRPF38AQ8NAV1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 AC073544.1-201ENST00000600110 1595 ntBASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 RNU5B-2P-201ENST00000363036 113 ntBASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 RNU6-331P-201ENST00000384724 107 ntBASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 AL078595.1-201ENST00000404458 226 ntBASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 RPL21P2-201ENST00000440049 481 ntBASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 RPL30P10-201ENST00000488148 337 ntBASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 RNA5SP384-201ENST00000516615 116 ntBASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 SNORA31.16-201ENST00000516773 139 ntBASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 AL590705.4-201ENST00000532209 134 ntBASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 CBX3P8-201ENST00000532412 525 ntBASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 MRPS36P4-201ENST00000534436 298 ntBASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 MIR4319-201ENST00000577285 85 ntBASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 AL450472.1-202ENST00000637286 180 ntBASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 AC069528.2-201ENST00000624849 1991 ntBASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PRPF38AQ8NAV1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 RNA5SP125-201ENST00000364843 120 ntBASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 RNU6-1032P-201ENST00000384100 107 ntBASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 RNU6-700P-201ENST00000391043 107 ntBASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 AL353752.1-201ENST00000454946 260 ntBASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 AC068781.1-201ENST00000488231 618 ntBASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 RPL23AP75-201ENST00000491601 451 ntBASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 RNU7-175P-201ENST00000515915 61 ntBASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 AC023824.2-201ENST00000566185 400 ntBASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 AL158827.2-201ENST00000602494 330 ntBASIC3.3□□□□□ -1.88
PRPF38AQ8NAV1 RPL23AP88-201ENST00000605759 454 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms