Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC090578.1-201ENST00000604955 591 ntBASIC1□□□□□ -2.25
ZIC4Q8N9L1 BNIP3P10-201ENST00000605360 577 ntBASIC1□□□□□ -2.25
ZIC4Q8N9L1 AC005014.3-201ENST00000605985 190 ntBASIC1□□□□□ -2.25
ZIC4Q8N9L1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1□□□□□ -2.25
ZIC4Q8N9L1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 AC092268.1-201ENST00000342691 405 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 MIR302D-201ENST00000362275 68 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 RNU6-336P-201ENST00000364891 107 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 RNU6-715P-201ENST00000365204 103 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 RNU6-169P-201ENST00000365336 107 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 RNU6-692P-201ENST00000384496 107 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 RNU6-550P-201ENST00000391057 101 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 RNU6-321P-201ENST00000410912 106 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 AC104850.1-201ENST00000435940 476 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 AL135790.2-201ENST00000437701 267 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 UBE2D3P4-201ENST00000441973 436 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 TAF9P1-201ENST00000445421 515 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 AC079781.2-201ENST00000446424 169 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 TAF9P2-201ENST00000454958 515 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 MTND2P39-201ENST00000457230 764 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 SNORD11.1-201ENST00000459482 85 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 ATP5EP1-201ENST00000510257 156 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 AC079140.3-201ENST00000511111 550 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 RNU6-1178P-201ENST00000516674 107 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 SNORA31.16-201ENST00000516773 139 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 HSPE1P4-201ENST00000550617 308 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 AC012507.3-201ENST00000603556 477 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 AC107304.1-201ENST00000604229 296 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 AC091304.9-201ENST00000612091 226 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 AC083806.3-201ENST00000614016 455 ntBASIC0.99□□□□□ -2.25
ZIC4Q8N9L1 AC010615.1-201ENST00000594254 1764 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 MIR340-201ENST00000362125 95 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 SNORD31B-201ENST00000364977 69 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 RNU6-939P-201ENST00000384634 107 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 RNA5SP201-201ENST00000410316 124 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 RNU6-584P-201ENST00000410350 95 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 AC027119.1-201ENST00000440877 241 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 ATP5J2P3-201ENST00000451550 258 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 AC079140.5-201ENST00000507882 310 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 TRMT112P2-201ENST00000512910 132 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 RNU5F-4P-201ENST00000516581 114 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 MIR3937-201ENST00000580135 106 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 MIR3682-201ENST00000581338 84 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 AC098848.2-201ENST00000588023 330 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 AC091805.2-201ENST00000603848 235 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 RPL17P51-201ENST00000605218 238 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 AL355802.3-201ENST00000607571 545 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 AL159152.1-201ENST00000635019 2587 ntBASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
ZIC4Q8N9L1 MIR337-201ENST00000362281 93 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 RNY1P10-201ENST00000363268 113 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 RNU6-1019P-201ENST00000364424 107 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 Y_RNA.367-201ENST00000365544 101 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 RNU6-1026P-201ENST00000384465 108 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 MTCO1P21-201ENST00000416634 589 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 RPS27P16-201ENST00000425758 201 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 AC007395.1-201ENST00000451333 677 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 RNU7-14P-201ENST00000459331 62 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 RAP1BP2-201ENST00000478270 544 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 RPL30P7-201ENST00000479312 323 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 AC016632.1-201ENST00000503994 196 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 RNU6-567P-201ENST00000516746 107 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 RNU2-46P-201ENST00000517038 113 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 SCARNA1-201ENST00000517138 166 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 AC090572.1-201ENST00000519251 160 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 AC019288.1-201ENST00000557918 224 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 AC012414.6-201ENST00000568241 401 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 AP005136.1-201ENST00000579765 429 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 AC080078.3-201ENST00000605407 463 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 PCGEM1.1-201ENST00000613431 131 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 AL078604.3-201ENST00000615580 211 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 AC011155.2-201ENST00000623202 216 ntBASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
ZIC4Q8N9L1 RNU6-428P-201ENST00000362942 107 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 RNU4-28P-201ENST00000364739 141 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 SNORA25.8-201ENST00000364831 128 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 Y_RNA.480-201ENST00000384364 102 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 RNU6-1065P-201ENST00000384513 106 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 SNORA26.3-201ENST00000391119 136 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 HIGD1AP15-201ENST00000416198 280 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 ARL5AP1-201ENST00000418991 388 ntBASIC0.96□□□□□ -2.26
ZIC4Q8N9L1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms