Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.45□□□□□ -2.18
COL27A1Q8IZC6 HMGB1P24-202ENST00000615653 685 ntBASIC1.45□□□□□ -2.18
COL27A1Q8IZC6 uc_338.34-201ENST00000617467 174 ntBASIC1.45□□□□□ -2.18
COL27A1Q8IZC6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
COL27A1Q8IZC6 AC138627.2-201ENST00000624202 601 ntBASIC1.45□□□□□ -2.18
COL27A1Q8IZC6 AC098679.4-201ENST00000624241 654 ntBASIC1.45□□□□□ -2.18
COL27A1Q8IZC6 MIR3529-201ENST00000637713 78 ntBASIC1.45□□□□□ -2.18
COL27A1Q8IZC6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
COL27A1Q8IZC6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 RNU6-105P-201ENST00000363909 104 ntBASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 RNU6-1068P-201ENST00000410958 103 ntBASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 AL353193.1-201ENST00000421444 268 ntBASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 AL365400.1-201ENST00000431854 640 ntBASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 AL137159.1-201ENST00000452808 512 ntBASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 AC006026.2-201ENST00000457376 180 ntBASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 AP001025.1-201ENST00000486139 332 ntBASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 SNORA19.2-201ENST00000516013 114 ntBASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 RNA5SP364-201ENST00000516938 78 ntBASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 MTCO3P23-201ENST00000561363 289 ntBASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 AC008752.3-201ENST00000588113 712 ntBASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 AC091152.3-201ENST00000604227 325 ntBASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 U4.7-201ENST00000638126 106 ntBASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 MTND5P35-201ENST00000557537 1720 ntBASIC1.44□□□□□ -2.18
COL27A1Q8IZC6 Y_RNA.38-201ENST00000362617 102 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 RNU6-428P-201ENST00000362942 107 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 AL513475.1-201ENST00000406602 315 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 CALM1P1-201ENST00000442082 433 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 RNU1-123P-201ENST00000458950 160 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 RNU6-1208P-201ENST00000459588 107 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 Y_RNA.670-201ENST00000516255 105 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 Y_RNA.693-201ENST00000516641 110 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 AC109479.2-201ENST00000517842 174 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 AC109635.3-201ENST00000529536 185 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 CYCSP26-201ENST00000534107 320 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 AL133241.1-201ENST00000556832 487 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 SNORD53B-201ENST00000577887 78 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 MIR3935-201ENST00000583472 104 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 MIR4424-201ENST00000585257 86 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 AC073539.2-201ENST00000597113 165 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 AL356157.2-201ENST00000605122 111 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 MIR6504-201ENST00000613520 61 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 DUXAP9-208ENST00000622815 614 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 AC027514.1-201ENST00000588561 1603 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 RNU6-78P-201ENST00000362897 107 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 Y_RNA.132-201ENST00000363421 102 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 Y_RNA.191-201ENST00000363972 113 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 Y_RNA.355-201ENST00000365462 98 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 Y_RNA.409-201ENST00000383990 98 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 RNU6-483P-201ENST00000384088 108 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 Y_RNA.453-201ENST00000384223 109 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 RNU6-1222P-201ENST00000384615 107 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 SNORA40.19-201ENST00000390846 128 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 SNORD56-201ENST00000413522 71 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 CYCSP33-201ENST00000414485 327 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 RPS15AP10-201ENST00000432472 382 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 RNU6-333P-201ENST00000459117 107 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 U8.21-201ENST00000459536 136 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 AC080013.2-201ENST00000460866 323 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 RNA5SP490-201ENST00000517141 136 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 MTND1P5-201ENST00000517906 940 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 RPL30P11-203ENST00000598995 310 ntBASIC1.43□□□□□ -2.18
COL27A1Q8IZC6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
COL27A1Q8IZC6 Y_RNA.6-201ENST00000362350 114 ntBASIC1.42□□□□□ -2.18
COL27A1Q8IZC6 RNY4P14-201ENST00000363656 96 ntBASIC1.42□□□□□ -2.18
COL27A1Q8IZC6 U3.13-201ENST00000364804 214 ntBASIC1.42□□□□□ -2.18
COL27A1Q8IZC6 RNU6-43P-201ENST00000384302 107 ntBASIC1.42□□□□□ -2.18
COL27A1Q8IZC6 RNU6-45P-201ENST00000384471 107 ntBASIC1.42□□□□□ -2.18
COL27A1Q8IZC6 SNORA16.2-201ENST00000390991 127 ntBASIC1.42□□□□□ -2.18
COL27A1Q8IZC6 RNU11-3P-201ENST00000391111 133 ntBASIC1.42□□□□□ -2.18
COL27A1Q8IZC6 AL133475.1-201ENST00000404414 305 ntBASIC1.42□□□□□ -2.18
COL27A1Q8IZC6 RNU2-63P-201ENST00000410792 194 ntBASIC1.42□□□□□ -2.18
COL27A1Q8IZC6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.42□□□□□ -2.18
COL27A1Q8IZC6 AC000111.3-201ENST00000433478 193 ntBASIC1.42□□□□□ -2.18
COL27A1Q8IZC6 ERLEC1P1-201ENST00000433806 578 ntBASIC1.42□□□□□ -2.18
COL27A1Q8IZC6 AL161651.1-201ENST00000440882 223 ntBASIC1.42□□□□□ -2.18
COL27A1Q8IZC6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms