Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 RPS3P1-201ENST00000456781 192 ntBASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 RN7SL354P-201ENST00000469282 294 ntBASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 RN7SKP19-201ENST00000516016 252 ntBASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 SNORA70.14-201ENST00000516205 110 ntBASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 RNU7-116P-201ENST00000516940 62 ntBASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 HSPE1P18-201ENST00000517602 280 ntBASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 AL160236.1-201ENST00000556317 195 ntBASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 RPL23AP97-201ENST00000568955 471 ntBASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 MIR4697-201ENST00000582977 78 ntBASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 AC140113.4-201ENST00000622087 222 ntBASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC116Q8IYX3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 SNORD114-19-201ENST00000363072 75 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 SNORD113.2-201ENST00000364166 89 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 MIR586-201ENST00000385035 97 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 MIRLET7F2-201ENST00000385277 83 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 SDHCP2-201ENST00000398565 501 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 AL355796.1-201ENST00000406706 323 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 MIR1185-2-201ENST00000408687 86 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 SNORA11-201ENST00000408789 128 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 AL121890.1-201ENST00000435457 205 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 RPS29P22-201ENST00000472363 168 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 AC006463.2-201ENST00000473326 348 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 AC023141.12-201ENST00000512399 199 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 RNU6-1299P-201ENST00000516316 100 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 AP001781.1-201ENST00000530977 207 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 RN7SL690P-201ENST00000582087 240 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 AL021707.8-201ENST00000609428 183 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 AL138880.2-201ENST00000616214 239 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 AC106754.2-201ENST00000623006 233 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 AL159152.1-201ENST00000635019 2587 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 CPHL1P-201ENST00000461341 3407 ntBASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC116Q8IYX3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 USP8P1-201ENST00000494673 3183 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 RNU6-508P-201ENST00000363231 103 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 SNORD73B-201ENST00000364394 72 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 RNU6-309P-201ENST00000364573 106 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 RNU1-63P-201ENST00000383902 164 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 SNORA70F-201ENST00000384142 135 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 MIR659-201ENST00000384963 97 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 U6atac.2-201ENST00000408644 118 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 RNA5SP146-201ENST00000410743 123 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 AC016397.1-201ENST00000412463 242 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 RNU2-58P-201ENST00000516403 183 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 SNORD19.2-201ENST00000516978 73 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 HIGD1AP1-201ENST00000550979 275 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 MIR4644-201ENST00000579929 84 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 AL049861.1-201ENST00000603130 150 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 AC005972.2-201ENST00000604690 348 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 AC012531.5-201ENST00000611375 151 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 AC025166.1-201ENST00000612411 163 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 AC007256.1-201ENST00000392253 2765 ntBASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC116Q8IYX3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 RNU1-20P-201ENST00000363314 162 ntBASIC4.22□□□□□ -1.73
CCDC116Q8IYX3 RNU6-674P-201ENST00000363831 107 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms