Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 RNU6-1158P-201ENST00000391167 107 ntBASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 BTF3L4P2-201ENST00000392798 346 ntBASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 AC007098.1-201ENST00000420122 367 ntBASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 RPL23AP95-201ENST00000426806 265 ntBASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 AL354695.1-201ENST00000427935 228 ntBASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 MTCO1P19-201ENST00000443487 500 ntBASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 AC091874.1-201ENST00000511402 339 ntBASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 AP001893.2-201ENST00000526949 202 ntBASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 AC090115.3-201ENST00000553218 849 ntBASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 AC015720.1-201ENST00000565251 277 ntBASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 AC103987.3-201ENST00000582071 292 ntBASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 MIR4424-201ENST00000585257 86 ntBASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 RSL24D1P11-201ENST00000591045 491 ntBASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 AC078883.4-201ENST00000623218 367 ntBASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.63□□□□□ -2.15
CCDC65Q8IXS2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 AP000560.1-201ENST00000624150 1937 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 RNU1-17P-201ENST00000363022 152 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 RNU1-42P-201ENST00000364033 160 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 SNORD114-6-201ENST00000364393 72 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 RNU6-517P-201ENST00000384362 110 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 MIR764-201ENST00000390811 85 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 SNORA26.3-201ENST00000391119 136 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 MTCYBP2-201ENST00000407745 171 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 RNA5SP201-201ENST00000410316 124 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 RN7SKP61-201ENST00000410642 295 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 AC090960.1-201ENST00000421072 306 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 AC244670.1-201ENST00000436879 112 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 SNRPFP3-201ENST00000457792 225 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 RNU6-956P-201ENST00000458868 103 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 RNU6-333P-201ENST00000459117 107 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 FAM206BP-201ENST00000510179 541 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 AC087441.2-201ENST00000529141 262 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 TRAV32-201ENST00000553993 340 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 MIR3169-201ENST00000578032 83 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 MIR3136-201ENST00000583498 78 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 AC110760.3-201ENST00000598794 467 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 AC107304.1-201ENST00000604229 296 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 AC008536.2-201ENST00000607284 349 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 AC022513.1-201ENST00000624512 117 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 MIR3974-201ENST00000637126 96 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 AL161722.3-201ENST00000605789 2983 ntBASIC1.62□□□□□ -2.15
CCDC65Q8IXS2 MIR340-201ENST00000362125 95 ntBASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 RNU6-996P-201ENST00000365438 107 ntBASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 Y_RNA.553-201ENST00000384670 102 ntBASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 EIF4EP2-201ENST00000422816 654 ntBASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 AL133396.1-201ENST00000432048 687 ntBASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 HSPE1P24-201ENST00000450782 238 ntBASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 AC091133.4-201ENST00000511142 308 ntBASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 SNORA44.1-201ENST00000517031 108 ntBASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 AP005660.1-201ENST00000522972 293 ntBASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 AC012507.3-201ENST00000603556 477 ntBASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 AL645939.4-201ENST00000604495 135 ntBASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
CCDC65Q8IXS2 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 RNU4-13P-201ENST00000364019 141 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 Y_RNA.332-201ENST00000365271 113 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 Y_RNA.381-201ENST00000365666 102 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 RNU5A-6P-201ENST00000384136 116 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 RNU6-1245P-201ENST00000411130 106 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 AC009310.1-201ENST00000414414 451 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 CDK8P2-201ENST00000415020 547 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 AL590135.1-201ENST00000422215 156 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 AC019205.3-201ENST00000424573 156 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 UBE2V1P4-201ENST00000425374 344 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 AC078809.1-201ENST00000427601 140 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 AC016700.2-201ENST00000446011 156 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 AC245102.2-201ENST00000448956 180 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 AL031274.1-201ENST00000450334 232 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 HMGN2P18-201ENST00000450680 270 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 TPT1P7-201ENST00000458300 517 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 SNRPGP7-201ENST00000469016 106 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 AC015911.1-201ENST00000495111 156 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 AC079140.3-201ENST00000511111 550 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.6□□□□□ -2.15
CCDC65Q8IXS2 AL160236.1-201ENST00000556317 195 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 245 ms