Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MTATP6P18-201ENST00000417994 673 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 MTND1P26-201ENST00000440488 538 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 AC243964.1-201ENST00000441814 261 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 RPS29P23-201ENST00000458635 123 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 SCARNA18-201ENST00000459004 134 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 GMFBP1-201ENST00000467831 427 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 RNU5F-2P-201ENST00000516066 82 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 AL160236.1-201ENST00000556317 195 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 AC103987.3-201ENST00000582071 292 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 VN1R80P-201ENST00000597126 338 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 Z99497.2-201ENST00000603634 310 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 PRR13P7-201ENST00000605538 430 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 AC087752.4-201ENST00000605911 462 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 AL022345.1-201ENST00000607292 135 ntBASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
CDKL3Q8IVW4 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 RNU1-62P-201ENST00000362599 164 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 RNU6-428P-201ENST00000362942 107 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 Y_RNA.99-201ENST00000363138 105 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 RNU6-1164P-201ENST00000364428 107 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 RNU6-336P-201ENST00000364891 107 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 Y_RNA.480-201ENST00000384364 102 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 RNU2-29P-201ENST00000410423 189 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 BTF3P4-201ENST00000418852 495 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AL590556.1-201ENST00000423231 483 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 SDAD1P3-201ENST00000427380 333 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AC079382.1-201ENST00000493346 557 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AC009646.1-201ENST00000510455 318 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AC109479.2-201ENST00000517842 174 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AP005660.1-201ENST00000522972 293 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AL356057.1-201ENST00000533798 831 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AL158211.1-201ENST00000566763 763 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AC091805.2-201ENST00000603848 235 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AC002044.1-201ENST00000606707 158 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AC008147.4-201ENST00000617570 1204 ntBASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
CDKL3Q8IVW4 RNU6-1285P-201ENST00000363480 105 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 Y_RNA.159-201ENST00000363674 87 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 RNU6-692P-201ENST00000384496 107 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 RNU6-903P-201ENST00000391270 109 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 FGF7P8-201ENST00000402994 292 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 RNU4-62P-201ENST00000410125 130 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 RNA5SP501-201ENST00000410990 112 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 CBX3P6-201ENST00000430257 527 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 HSPE1P24-201ENST00000450782 238 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 AL356010.1-201ENST00000456364 102 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 SNRPFP3-201ENST00000457792 225 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 RNU6-956P-201ENST00000458868 103 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 SNRPGP7-201ENST00000469016 106 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 AC105417.1-201ENST00000514691 285 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 SNORA25.17-201ENST00000517184 124 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 AP005597.4-201ENST00000526762 229 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 AC115990.1-201ENST00000526957 301 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 AGGF1P4-201ENST00000568249 801 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 MTATP6P3-201ENST00000581686 676 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 AC008752.3-201ENST00000588113 712 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 RSL24D1P11-201ENST00000591045 491 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 AC107304.1-201ENST00000604229 296 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 Z69908.1-201ENST00000622603 247 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 MIR1248-201ENST00000629190 106 ntBASIC1.41□□□□□ -2.18
CDKL3Q8IVW4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 MTND4P14-201ENST00000435799 1354 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 CBX3P1-201ENST00000325243 554 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 RNU6-552P-201ENST00000362869 119 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 RNU6-266P-201ENST00000364225 107 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 RNU6-203P-201ENST00000384038 104 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 SNORA75-201ENST00000384158 137 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 AP1B1P2-201ENST00000416196 106 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 CETN4P-201ENST00000432407 469 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 AL031274.1-201ENST00000450334 232 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 AC013470.1-201ENST00000453438 462 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 AC112492.4-201ENST00000456549 352 ntBASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.4□□□□□ -2.19
CDKL3Q8IVW4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms