Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RN7SKP32-201ENST00000410167 303 ntBASIC2.05□□□□□ -2.08
CASC4Q6P4E1 RNA5SP201-201ENST00000410316 124 ntBASIC2.05□□□□□ -2.08
CASC4Q6P4E1 SRIP3-201ENST00000413200 219 ntBASIC2.05□□□□□ -2.08
CASC4Q6P4E1 DPH3P2-201ENST00000422618 250 ntBASIC2.05□□□□□ -2.08
CASC4Q6P4E1 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.05□□□□□ -2.08
CASC4Q6P4E1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.05□□□□□ -2.08
CASC4Q6P4E1 AL353705.4-201ENST00000449661 238 ntBASIC2.05□□□□□ -2.08
CASC4Q6P4E1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.05□□□□□ -2.08
CASC4Q6P4E1 RPS29P27-201ENST00000463711 170 ntBASIC2.05□□□□□ -2.08
CASC4Q6P4E1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.05□□□□□ -2.08
CASC4Q6P4E1 AC092436.3-201ENST00000511788 257 ntBASIC2.05□□□□□ -2.08
CASC4Q6P4E1 RNU6-991P-201ENST00000516168 107 ntBASIC2.05□□□□□ -2.08
CASC4Q6P4E1 Y_RNA.665-201ENST00000516177 98 ntBASIC2.05□□□□□ -2.08
CASC4Q6P4E1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.05□□□□□ -2.08
CASC4Q6P4E1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.05□□□□□ -2.08
CASC4Q6P4E1 Z98751.3-201ENST00000604447 521 ntBASIC2.05□□□□□ -2.08
CASC4Q6P4E1 AC012557.2-201ENST00000605919 418 ntBASIC2.05□□□□□ -2.08
CASC4Q6P4E1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
CASC4Q6P4E1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.05□□□□□ -2.08
CASC4Q6P4E1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CASC4Q6P4E1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.05□□□□□ -2.08
CASC4Q6P4E1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
CASC4Q6P4E1 Y_RNA.3-201ENST00000362331 103 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 RNU4-56P-201ENST00000364700 142 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 SNORD14D-201ENST00000384390 87 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 MIR181A1-201ENST00000385026 110 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 SNORA40.19-201ENST00000390846 128 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 Y_RNA.615-201ENST00000410769 117 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 AL139156.1-201ENST00000412785 841 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.04□□□□□ -2.08
CASC4Q6P4E1 AC096920.1-201ENST00000423991 241 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 MTCO1P20-201ENST00000425366 358 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 C8orf59P1-201ENST00000429930 303 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 AC009541.1-201ENST00000438279 2662 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 HMGN2P26-201ENST00000463169 339 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 AC093259.1-201ENST00000509755 300 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.04□□□□□ -2.08
CASC4Q6P4E1 AC025465.4-201ENST00000513422 638 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 RNU6-1332P-201ENST00000516666 104 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.04□□□□□ -2.08
CASC4Q6P4E1 SCOCP1-201ENST00000554676 349 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 MIR3923-201ENST00000579521 83 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 MIR4448-201ENST00000584360 86 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 AC104458.1-201ENST00000608243 463 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 AC098657.3-201ENST00000620434 263 ntBASIC2.04□□□□□ -2.08
CASC4Q6P4E1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.04□□□□□ -2.08
CASC4Q6P4E1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.04□□□□□ -2.08
CASC4Q6P4E1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.03□□□□□ -2.08
CASC4Q6P4E1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CASC4Q6P4E1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
CASC4Q6P4E1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CASC4Q6P4E1 RNU6-227P-201ENST00000362865 103 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 RNU6-1164P-201ENST00000364428 107 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 RNU6-1317P-201ENST00000364582 104 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 Y_RNA.256-201ENST00000364594 104 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 Y_RNA.554-201ENST00000384672 102 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 AL023284.1-201ENST00000403956 276 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 MIR1283-2-201ENST00000408621 87 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 Z98742.3-201ENST00000418637 326 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.03□□□□□ -2.08
CASC4Q6P4E1 BX510359.4-201ENST00000423750 193 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.03□□□□□ -2.08
CASC4Q6P4E1 MTND3P9-201ENST00000429526 346 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.03□□□□□ -2.08
CASC4Q6P4E1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CASC4Q6P4E1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.03□□□□□ -2.08
CASC4Q6P4E1 AMD1P1-201ENST00000457220 922 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 RPL9P9-202ENST00000466501 579 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.03□□□□□ -2.08
CASC4Q6P4E1 RNA5SP364-201ENST00000516938 78 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 HSPE1P18-201ENST00000517602 280 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.03□□□□□ -2.08
CASC4Q6P4E1 IGKV3-31-201ENST00000523109 329 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.03□□□□□ -2.08
CASC4Q6P4E1 AC021231.3-201ENST00000558497 370 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 TPRKBP2-201ENST00000565969 475 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.03□□□□□ -2.08
CASC4Q6P4E1 AC078899.2-201ENST00000595282 212 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 AL096840.1-201ENST00000603287 93 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 CTHRC1P1-201ENST00000605383 469 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 AP000654.2-201ENST00000605633 586 ntBASIC2.03□□□□□ -2.08
CASC4Q6P4E1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
CASC4Q6P4E1 ZNF702P-202ENST00000434269 1966 ntBASIC2.02□□□□□ -2.09
CASC4Q6P4E1 RNA5SP276-201ENST00000362580 94 ntBASIC2.02□□□□□ -2.09
CASC4Q6P4E1 Y_RNA.373-201ENST00000365600 103 ntBASIC2.02□□□□□ -2.09
CASC4Q6P4E1 SNORA67.3-201ENST00000384366 140 ntBASIC2.02□□□□□ -2.09
CASC4Q6P4E1 SNORA64-201ENST00000384674 134 ntBASIC2.02□□□□□ -2.09
CASC4Q6P4E1 MIR29C-201ENST00000385231 88 ntBASIC2.02□□□□□ -2.09
CASC4Q6P4E1 MIR450B-201ENST00000401182 78 ntBASIC2.02□□□□□ -2.09
CASC4Q6P4E1 RNU4-26P-201ENST00000410270 107 ntBASIC2.02□□□□□ -2.09
CASC4Q6P4E1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.02□□□□□ -2.09
CASC4Q6P4E1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.02□□□□□ -2.09
CASC4Q6P4E1 AC104564.1-201ENST00000493028 407 ntBASIC2.02□□□□□ -2.09
CASC4Q6P4E1 AC021146.2-201ENST00000504736 556 ntBASIC2.02□□□□□ -2.09
CASC4Q6P4E1 AC008549.1-201ENST00000512900 643 ntBASIC2.02□□□□□ -2.09
CASC4Q6P4E1 AC109635.3-201ENST00000529536 185 ntBASIC2.02□□□□□ -2.09
CASC4Q6P4E1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.02□□□□□ -2.09
CASC4Q6P4E1 AC109446.1-201ENST00000566172 220 ntBASIC2.02□□□□□ -2.09
CASC4Q6P4E1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.02□□□□□ -2.09
CASC4Q6P4E1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms