Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.01□□□□□ -1.77
RNF43Q68DV7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC4.01□□□□□ -1.77
RNF43Q68DV7 AC090132.2-201ENST00000615881 347 ntBASIC4.01□□□□□ -1.77
RNF43Q68DV7 MIR6715B-201ENST00000637172 77 ntBASIC4.01□□□□□ -1.77
RNF43Q68DV7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF43Q68DV7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF43Q68DV7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF43Q68DV7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.01□□□□□ -1.77
RNF43Q68DV7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF43Q68DV7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF43Q68DV7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.01□□□□□ -1.77
RNF43Q68DV7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF43Q68DV7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
RNF43Q68DV7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF43Q68DV7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF43Q68DV7 RNU1-140P-201ENST00000365040 165 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 SNORA36A-201ENST00000384221 132 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 Y_RNA.498-201ENST00000384460 102 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 U8.11-201ENST00000384699 133 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 U8.12-201ENST00000384701 133 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 RNU6-376P-201ENST00000384731 106 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 RPL21P17-201ENST00000397467 475 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 AL356867.1-201ENST00000429623 299 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 AC006026.2-201ENST00000457376 180 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 snoU13.6-201ENST00000458785 104 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 U8.18-201ENST00000459285 133 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 RN7SKP164-201ENST00000516138 266 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 AP004607.1-201ENST00000524456 203 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 AC021269.2-201ENST00000532318 330 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 CYCSP26-201ENST00000534107 320 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF43Q68DV7 AC090877.1-201ENST00000561418 344 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 CYCSP39-201ENST00000565821 309 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 AC009127.3-201ENST00000570531 403 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 MIR5571-201ENST00000577998 113 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 MIR3613-201ENST00000579844 87 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 U3.45-201ENST00000607547 219 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 MIR6129-201ENST00000616087 109 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 AC024581.2-201ENST00000619986 252 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
RNF43Q68DV7 MTND5P35-201ENST00000557537 1720 ntBASIC4□□□□□ -1.77
RNF43Q68DV7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF43Q68DV7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
RNF43Q68DV7 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF43Q68DV7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4□□□□□ -1.77
RNF43Q68DV7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF43Q68DV7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF43Q68DV7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF43Q68DV7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF43Q68DV7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF43Q68DV7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RNF43Q68DV7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF43Q68DV7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF43Q68DV7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF43Q68DV7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RNF43Q68DV7 RNU6-942P-201ENST00000363002 107 ntBASIC3.99□□□□□ -1.77
RNF43Q68DV7 RNU6-629P-201ENST00000384061 103 ntBASIC3.99□□□□□ -1.77
RNF43Q68DV7 RNU6-356P-201ENST00000384140 107 ntBASIC3.99□□□□□ -1.77
RNF43Q68DV7 MIR183-201ENST00000384958 110 ntBASIC3.99□□□□□ -1.77
RNF43Q68DV7 RPL27AP8-201ENST00000424277 446 ntBASIC3.99□□□□□ -1.77
RNF43Q68DV7 GPM6BP3-201ENST00000442797 145 ntBASIC3.99□□□□□ -1.77
RNF43Q68DV7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF43Q68DV7 RNU7-197P-201ENST00000458836 62 ntBASIC3.99□□□□□ -1.77
RNF43Q68DV7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF43Q68DV7 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF43Q68DV7 AC127455.1-201ENST00000565496 145 ntBASIC3.99□□□□□ -1.77
RNF43Q68DV7 MIR3921-201ENST00000577308 85 ntBASIC3.99□□□□□ -1.77
RNF43Q68DV7 MIR4644-201ENST00000579929 84 ntBASIC3.99□□□□□ -1.77
RNF43Q68DV7 AC020895.1-201ENST00000595362 272 ntBASIC3.99□□□□□ -1.77
RNF43Q68DV7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF43Q68DV7 AC005520.5-201ENST00000613926 164 ntBASIC3.99□□□□□ -1.77
RNF43Q68DV7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF43Q68DV7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF43Q68DV7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF43Q68DV7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF43Q68DV7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RNF43Q68DV7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RNF43Q68DV7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF43Q68DV7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RNF43Q68DV7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RNF43Q68DV7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RNF43Q68DV7 RNU6-103P-201ENST00000363686 107 ntBASIC3.98□□□□□ -1.77
RNF43Q68DV7 RNU6-270P-201ENST00000364131 105 ntBASIC3.98□□□□□ -1.77
RNF43Q68DV7 snoU2_19.4-201ENST00000364329 80 ntBASIC3.98□□□□□ -1.77
RNF43Q68DV7 Y_RNA.329-201ENST00000365209 107 ntBASIC3.98□□□□□ -1.77
RNF43Q68DV7 RNA5SP235-201ENST00000365411 114 ntBASIC3.98□□□□□ -1.77
RNF43Q68DV7 Z98749.2-208ENST00000381646 500 ntBASIC3.98□□□□□ -1.77
RNF43Q68DV7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RNF43Q68DV7 SNORA3.3-201ENST00000408712 125 ntBASIC3.98□□□□□ -1.77
RNF43Q68DV7 RNU2-54P-201ENST00000410299 190 ntBASIC3.98□□□□□ -1.77
RNF43Q68DV7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF43Q68DV7 AC112220.1-201ENST00000434628 355 ntBASIC3.98□□□□□ -1.77
RNF43Q68DV7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF43Q68DV7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.98□□□□□ -1.77
RNF43Q68DV7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.98□□□□□ -1.77
RNF43Q68DV7 RAC1P5-201ENST00000512182 576 ntBASIC3.98□□□□□ -1.77
RNF43Q68DV7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.98□□□□□ -1.77
RNF43Q68DV7 AC244505.7-201ENST00000599675 272 ntBASIC3.98□□□□□ -1.77
RNF43Q68DV7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms