Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC107304.1-201ENST00000604229 296 ntBASIC-0.24□□□□□ -2.45
UBR4Q5T4S7 AC117490.2-201ENST00000610042 594 ntBASIC-0.24□□□□□ -2.45
UBR4Q5T4S7 AC011939.3-201ENST00000613686 466 ntBASIC-0.24□□□□□ -2.45
UBR4Q5T4S7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 RNU6-884P-201ENST00000363889 107 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 AC016831.2-201ENST00000417179 352 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 AC007215.1-201ENST00000464893 276 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 AC022616.3-201ENST00000523940 148 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 UBE2Q2P6-201ENST00000612666 153 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 MIR6502-201ENST00000617296 76 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 MIR8063-201ENST00000621930 81 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 RNU6-553P-201ENST00000364047 96 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 RNU6-233P-201ENST00000410845 141 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 AC016909.1-201ENST00000415916 166 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 RPL31P53-201ENST00000457065 348 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 HMGN1P13-201ENST00000505795 138 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 AC132825.8-201ENST00000640783 297 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 SNORD99-201ENST00000408612 74 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 MTCO2P25-201ENST00000447065 681 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 HAUS1P3-201ENST00000523909 662 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 AC022616.8-201ENST00000533569 253 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 AC091152.3-201ENST00000604227 325 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 MTCO2P34-201ENST00000421994 607 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 MTCYBP3-201ENST00000445588 1137 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 ZNF886P-201ENST00000450781 723 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 snoU13.4-201ENST00000458916 104 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 AC027338.1-201ENST00000514840 825 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 AC138869.1-201ENST00000568623 124 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 MIR3664-201ENST00000579074 99 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 AC011921.3-201ENST00000605540 361 ntBASIC-0.25□□□□□ -2.45
UBR4Q5T4S7 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 SNORD115-3-201ENST00000363100 82 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 RNU1-39P-201ENST00000383897 165 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 RNU6-83P-201ENST00000384568 112 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 RNU6-910P-201ENST00000390844 107 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 RPS20P2-201ENST00000402520 389 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 MTND4P15-201ENST00000437913 1033 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 BRK1P2-201ENST00000442875 223 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 RNU7-157P-201ENST00000459600 66 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 BBIP1P1-201ENST00000602999 279 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AL445584.3-201ENST00000617173 78 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 SNORD116-13-201ENST00000384408 92 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 ELOCP24-201ENST00000456370 334 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AC013267.1-201ENST00000458227 267 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 RPL37P6-201ENST00000460682 294 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AL049714.1-201ENST00000466686 347 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AC069113.3-201ENST00000521019 150 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 SNRPGP20-201ENST00000604477 205 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 MT-TY-201ENST00000387409 66 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 NDUFS5P4-201ENST00000412983 318 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 HNRNPDLP3-201ENST00000456745 380 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AC025423.5-201ENST00000550230 219 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AC090897.1-201ENST00000580909 226 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AL355802.4-201ENST00000607635 548 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 RNU4-36P-201ENST00000364294 144 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 MIR643-201ENST00000385267 97 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AC123900.1-201ENST00000420390 96 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AC010587.2-201ENST00000511727 448 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 MTND2P26-201ENST00000528255 1029 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AC233702.2-202ENST00000562547 291 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AC107954.1-201ENST00000565906 727 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 MIR3139-201ENST00000579145 76 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AC004223.4-201ENST00000612426 332 ntBASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.26□□□□□ -2.45
UBR4Q5T4S7 AL031313.1-201ENST00000448435 256 ntBASIC-0.27□□□□□ -2.45
UBR4Q5T4S7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms