Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 MIR144-201ENST00000384886 86 ntBASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 Z82205.1-201ENST00000428456 297 ntBASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 USP9YP30-201ENST00000430729 455 ntBASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 CR769767.1-201ENST00000436337 346 ntBASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 AC105272.1-201ENST00000438604 198 ntBASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 AC079354.2-201ENST00000453523 154 ntBASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 AC026782.1-201ENST00000512952 449 ntBASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 AC096725.1-201ENST00000514266 313 ntBASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 RNA5SP402-201ENST00000517148 110 ntBASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 SNORA70.24-201ENST00000517233 118 ntBASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 MIR5696-201ENST00000578474 85 ntBASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 MIR4273-201ENST00000582824 84 ntBASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 AC009318.2-201ENST00000610917 651 ntBASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 AC104260.1-201ENST00000616660 539 ntBASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 AC098657.3-201ENST00000620434 263 ntBASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 MTND5P9-201ENST00000503854 1755 ntBASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
LRIF1Q5T3J3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 RPS26P42-201ENST00000413485 326 ntBASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 AC093019.1-201ENST00000443135 252 ntBASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 RPS3AP12-201ENST00000443616 753 ntBASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 AC145146.1-201ENST00000496370 254 ntBASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 AC021146.2-201ENST00000504736 556 ntBASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 FGF7P4-201ENST00000509595 295 ntBASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 Y_RNA.708-201ENST00000516950 96 ntBASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 AC134698.4-201ENST00000523451 826 ntBASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 CBX3P7-201ENST00000532876 502 ntBASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 AC011494.1-201ENST00000596454 237 ntBASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 AC113139.1-201ENST00000605049 239 ntBASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 AL137847.3-201ENST00000611521 109 ntBASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.35□□□□□ -2.03
LRIF1Q5T3J3 ZNF271P-202ENST00000465539 1970 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 Y_RNA.263-201ENST00000364659 114 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 SNORA9-201ENST00000384215 133 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 SNORA36A-201ENST00000384221 132 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 Y_RNA.474-201ENST00000384341 102 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 Y_RNA.490-201ENST00000384413 102 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 SNORA41-201ENST00000384675 132 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 RNU6-1050P-201ENST00000410388 107 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 Y_RNA.597-201ENST00000410463 100 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 RNA5SP494-201ENST00000410653 129 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 SUMO1P4-201ENST00000429430 302 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 AL353705.4-201ENST00000449661 238 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 SLC25A15P5-201ENST00000508033 253 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 AC005741.1-201ENST00000511094 432 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 MRPS36P4-201ENST00000534436 298 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 AC109446.1-201ENST00000566172 220 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 PCGEM1.1-201ENST00000613431 131 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 SCARNA4-201ENST00000629045 128 ntBASIC2.34□□□□□ -2.03
LRIF1Q5T3J3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
LRIF1Q5T3J3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 RNU6-859P-201ENST00000362728 107 ntBASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 RNU6-1159P-201ENST00000362933 107 ntBASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 U3.9-201ENST00000363823 204 ntBASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 SNORD32B-201ENST00000364460 84 ntBASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 RNU4-9P-201ENST00000364951 139 ntBASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 RNU6-842P-201ENST00000384269 107 ntBASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 SNORA46.1-201ENST00000391069 153 ntBASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 Y_RNA.594-201ENST00000410373 140 ntBASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 AC009238.1-201ENST00000442165 424 ntBASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 AC009237.6-201ENST00000446969 424 ntBASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 AC132942.1-201ENST00000486753 483 ntBASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 RPL23AP75-201ENST00000491601 451 ntBASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 HMGB3P3-201ENST00000510526 400 ntBASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 AC022616.8-201ENST00000533569 253 ntBASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 EIF4A1P12-201ENST00000551910 141 ntBASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.33□□□□□ -2.04
LRIF1Q5T3J3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 1255.1 ms