Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 SNORD59.2-201ENST00000516873 68 ntBASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 SNORA31.23-201ENST00000517219 133 ntBASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 HSPE1P4-201ENST00000550617 308 ntBASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 RPS29P30-201ENST00000600975 111 ntBASIC3.41□□□□□ -1.86
CCDC178Q5BJE1 RBBP8P1-201ENST00000449447 1844 ntBASIC3.4□□□□□ -1.86
CCDC178Q5BJE1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC178Q5BJE1 AC023141.4-201ENST00000412031 328 ntBASIC3.4□□□□□ -1.87
CCDC178Q5BJE1 AC107626.1-201ENST00000471084 183 ntBASIC3.4□□□□□ -1.87
CCDC178Q5BJE1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC178Q5BJE1 AL161670.1-201ENST00000554348 137 ntBASIC3.4□□□□□ -1.87
CCDC178Q5BJE1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC178Q5BJE1 MIR3671-201ENST00000580455 88 ntBASIC3.4□□□□□ -1.87
CCDC178Q5BJE1 RPL23AP78-201ENST00000599928 470 ntBASIC3.4□□□□□ -1.87
CCDC178Q5BJE1 AL355297.3-201ENST00000604082 446 ntBASIC3.4□□□□□ -1.87
CCDC178Q5BJE1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.4□□□□□ -1.87
CCDC178Q5BJE1 MIR3529-201ENST00000637713 78 ntBASIC3.4□□□□□ -1.87
CCDC178Q5BJE1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC178Q5BJE1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC178Q5BJE1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 U3.13-201ENST00000364804 214 ntBASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 RNU4-9P-201ENST00000364951 139 ntBASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 Y_RNA.380-201ENST00000365663 111 ntBASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 MIR32-201ENST00000384965 70 ntBASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 MIR1252-201ENST00000408861 65 ntBASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 RNU6-1140P-201ENST00000410517 106 ntBASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 RNA5SP344-201ENST00000411081 104 ntBASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 AL358453.1-201ENST00000422522 250 ntBASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 AC107083.1-201ENST00000439643 279 ntBASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 AC007969.2-201ENST00000441891 191 ntBASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 AC009296.1-201ENST00000443146 155 ntBASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 snoU13.30-201ENST00000458951 104 ntBASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 RPL30P1-201ENST00000488676 339 ntBASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 RPL23AP75-201ENST00000491601 451 ntBASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 AC104564.1-201ENST00000493028 407 ntBASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 AC097462.2-201ENST00000504623 481 ntBASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC178Q5BJE1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 RNU6-222P-201ENST00000362438 107 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 NDUFB4P4-201ENST00000404822 243 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 MTCYBP2-201ENST00000407745 171 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 MTCO3P19-201ENST00000415864 321 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 EIF1AXP1-201ENST00000419267 435 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 AL714022.1-201ENST00000439897 151 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 GPM6BP3-201ENST00000442797 145 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 RPS29P26-201ENST00000477483 171 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 AC104581.2-201ENST00000572227 430 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 AC010928.2-201ENST00000588017 287 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 AC006006.1-201ENST00000603082 144 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 AL390123.1-201ENST00000603216 237 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 PRR13P7-201ENST00000605538 430 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 AC010205.1-201ENST00000616668 449 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 U4.1-201ENST00000620349 87 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 AL355596.1-201ENST00000565399 3996 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 AC093831.2-201ENST00000624393 3427 ntBASIC3.38□□□□□ -1.87
CCDC178Q5BJE1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 SNORD32A-201ENST00000364805 84 ntBASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 RNU6-1286P-201ENST00000383871 107 ntBASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 RNU6-142P-201ENST00000384019 107 ntBASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 Y_RNA.452-201ENST00000384202 108 ntBASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 SNORA36A-201ENST00000384221 132 ntBASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 Y_RNA.471-201ENST00000384312 102 ntBASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 Y_RNA.526-201ENST00000384572 110 ntBASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 RNU6-19P-201ENST00000384718 107 ntBASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 RNU6-1109P-201ENST00000391187 107 ntBASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 DYNLT3P2-201ENST00000442517 295 ntBASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 RPL39P29-201ENST00000447779 157 ntBASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 AC087477.1-201ENST00000465747 340 ntBASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 RNY3P15-201ENST00000516297 97 ntBASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 AC090115.4-201ENST00000609970 188 ntBASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 AL021879.1-201ENST00000611756 288 ntBASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC178Q5BJE1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 RNU1-35P-201ENST00000362782 153 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 Y_RNA.193-201ENST00000363979 102 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 RNU4-50P-201ENST00000364361 141 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 RNU6-702P-201ENST00000364982 107 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 Y_RNA.401-201ENST00000383965 117 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 SNORA29-201ENST00000384183 140 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 RNU6-843P-201ENST00000384454 104 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 RNU6-713P-201ENST00000384761 107 ntBASIC3.36□□□□□ -1.87
CCDC178Q5BJE1 MIR512-1-201ENST00000384913 84 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms