Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 RN7SKP43-201ENST00000516173 320 ntBASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 RN7SKP282-201ENST00000516824 299 ntBASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 RN7SKP272-201ENST00000516988 232 ntBASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 RNU6-1137P-201ENST00000517073 99 ntBASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 MIR2355-201ENST00000517199 87 ntBASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 SCARNA11.3-201ENST00000517276 130 ntBASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 AC008737.2-201ENST00000599446 118 ntBASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 AL359198.2-201ENST00000611836 194 ntBASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 MIR1244-1-201ENST00000612829 85 ntBASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 AL137790.1-201ENST00000634283 177 ntBASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 MIR1244-3-201ENST00000635744 85 ntBASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 MIR1244-2-201ENST00000636449 85 ntBASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 MIR1244-4-202ENST00000636813 85 ntBASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.93□□□□□ -1.94
PTCHD3Q3KNS1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 RNU6-529P-201ENST00000363383 104 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 SNORA71.1-201ENST00000364523 117 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 DYNLT3P1-201ENST00000378574 347 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 MIR153-2-201ENST00000385225 87 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 Y_RNA.645-201ENST00000391229 102 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 AL133475.1-201ENST00000404414 305 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 Y_RNA.605-201ENST00000410577 105 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 RN7SKP220-201ENST00000410611 288 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 RPS26P42-201ENST00000413485 326 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 MTCO3P19-201ENST00000415864 321 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 AC022018.1-201ENST00000430685 241 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 MTCO3P29-201ENST00000432119 779 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 AC025750.2-201ENST00000442609 450 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 AL353752.1-201ENST00000454946 260 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 MTND5P22-201ENST00000458380 195 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 AC087477.1-201ENST00000465747 340 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 SNRPGP7-201ENST00000469016 106 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 AF186996.7-201ENST00000492781 209 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 RNU6-1198P-201ENST00000516904 67 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 Y_RNA.720-201ENST00000517166 92 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 AC136443.5-201ENST00000603741 370 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 UCA1.1-201ENST00000620952 75 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 SCARNA15.3-201ENST00000626315 122 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 SCARNA4.1-201ENST00000628597 123 ntBASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
PTCHD3Q3KNS1 AL359854.1-201ENST00000614203 1594 ntBASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 RNU6-1159P-201ENST00000362933 107 ntBASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 Y_RNA.111-201ENST00000363248 100 ntBASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 Y_RNA.526-201ENST00000384572 110 ntBASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 Y_RNA.592-201ENST00000410274 109 ntBASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 AC012306.1-201ENST00000423267 114 ntBASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 Z82188.1-201ENST00000436709 154 ntBASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 CHEK2P4-201ENST00000450340 246 ntBASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 RPL36AP48-201ENST00000485521 314 ntBASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 AC021146.2-201ENST00000504736 556 ntBASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 RNU6-764P-201ENST00000516396 105 ntBASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 AC022616.4-201ENST00000522985 181 ntBASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 HSBP1P1-201ENST00000555205 166 ntBASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 AC104695.3-201ENST00000604052 296 ntBASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 AL162373.1-201ENST00000620433 407 ntBASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 AC091812.1-201ENST00000432235 1948 ntBASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PTCHD3Q3KNS1 AC009487.2-201ENST00000420969 6821 ntBASIC2.9□□□□□ -1.94
PTCHD3Q3KNS1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
PTCHD3Q3KNS1 RNU6-874P-201ENST00000362390 105 ntBASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 Y_RNA.380-201ENST00000365663 111 ntBASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 Y_RNA.424-201ENST00000384063 103 ntBASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 Y_RNA.455-201ENST00000384230 98 ntBASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 AC097463.2-201ENST00000421074 142 ntBASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 AL590135.1-201ENST00000422215 156 ntBASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 AC019205.3-201ENST00000424573 156 ntBASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 AIMP1P2-201ENST00000425294 312 ntBASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 AC016700.2-201ENST00000446011 156 ntBASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 OR2AQ1P-201ENST00000451972 200 ntBASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 SNORA59A-201ENST00000459326 152 ntBASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 AC117440.1-201ENST00000474107 571 ntBASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 RPL31P41-201ENST00000477967 372 ntBASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 ANXA2P1-201ENST00000505539 926 ntBASIC2.9□□□□□ -1.95
PTCHD3Q3KNS1 RAC1P5-201ENST00000512182 576 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms