Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RNU6-1060P-201ENST00000384664 107 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 RNY3P10-201ENST00000384764 102 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 SNORA40.6-201ENST00000391153 128 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 MIR1267-201ENST00000408723 78 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.51□□□□□ -2.17
CCNA1P78396 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.51□□□□□ -2.17
CCNA1P78396 MTND3P17-201ENST00000416968 344 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 FTH1P12-201ENST00000432137 551 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 AC007969.2-201ENST00000441891 191 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.51□□□□□ -2.17
CCNA1P78396 AL033528.1-201ENST00000453780 140 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 AL122001.1-201ENST00000457027 370 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 RPS29P15-201ENST00000458329 171 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 AC010486.2-201ENST00000505572 483 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 AC009646.1-201ENST00000510455 318 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 AC012414.6-201ENST00000568241 401 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.51□□□□□ -2.17
CCNA1P78396 AC018889.1-201ENST00000605372 397 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 AL590240.4-201ENST00000616908 390 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 AC011155.2-201ENST00000623202 216 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.51□□□□□ -2.17
CCNA1P78396 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CCNA1P78396 RNU6-527P-201ENST00000363425 104 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 Y_RNA.201-201ENST00000364052 96 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 SNORD114-22-201ENST00000365423 72 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 RNU6-1-201ENST00000383898 107 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 RNU6-42P-201ENST00000384165 107 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 RNU6-36P-201ENST00000384172 107 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 RNU6-4P-201ENST00000384205 107 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 RNU6-74P-201ENST00000384235 107 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 RNU6-5P-201ENST00000384238 107 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 RNU6-3P-201ENST00000384314 107 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 RNU6-45P-201ENST00000384471 107 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 RNU6-2-201ENST00000384627 107 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 RNU6-9-201ENST00000384776 107 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 RNU6-33P-201ENST00000384793 107 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 RNU2-3P-201ENST00000410144 191 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 EBAG9P1-201ENST00000418955 543 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 MTND2P18-201ENST00000419962 1030 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.5□□□□□ -2.17
CCNA1P78396 AC079781.2-201ENST00000446424 169 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 HSPE1P24-201ENST00000450782 238 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 MTND3P7-201ENST00000474435 343 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 AC004223.1-201ENST00000479840 271 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 AC010409.1-201ENST00000487382 476 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.5□□□□□ -2.17
CCNA1P78396 RNA5SP220-201ENST00000516298 104 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.5□□□□□ -2.17
CCNA1P78396 AC145350.1-201ENST00000567426 208 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.5□□□□□ -2.17
CCNA1P78396 Z84480.1-201ENST00000605131 311 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 RNU6-6P-201ENST00000606623 107 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.5□□□□□ -2.17
CCNA1P78396 MTND5P17-201ENST00000418405 1603 ntBASIC1.5□□□□□ -2.17
CCNA1P78396 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.5□□□□□ -2.17
CCNA1P78396 RNU1-22P-201ENST00000363334 158 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 RNU6-715P-201ENST00000365204 103 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 RNU6-282P-201ENST00000365357 103 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 RNU6-439P-201ENST00000384188 106 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 RNU5A-2P-201ENST00000384337 116 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 MIR454-201ENST00000390180 115 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
CCNA1P78396 RNU6-248P-201ENST00000410720 107 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 RNU6-607P-201ENST00000411283 108 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 CYCSP33-201ENST00000414485 327 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 AL360221.1-201ENST00000445989 335 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.49□□□□□ -2.17
CCNA1P78396 AC079448.1-201ENST00000449377 373 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.49□□□□□ -2.17
CCNA1P78396 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.49□□□□□ -2.17
CCNA1P78396 AC005908.1-201ENST00000468701 347 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 MTCO3P28-201ENST00000513351 515 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 SNORD27.1-201ENST00000516319 72 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 RNU6-1178P-201ENST00000516674 107 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 RNA5SP503-201ENST00000517047 117 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 AL356057.1-201ENST00000533798 831 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 AC073413.2-201ENST00000604332 360 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 AC120349.3-201ENST00000624377 529 ntBASIC1.49□□□□□ -2.17
CCNA1P78396 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.49□□□□□ -2.17
CCNA1P78396 OR4G1P-203ENST00000641984 1631 ntBASIC1.48□□□□□ -2.17
CCNA1P78396 Y_RNA.332-201ENST00000365271 113 ntBASIC1.48□□□□□ -2.17
CCNA1P78396 RNU6-1029P-201ENST00000384109 107 ntBASIC1.48□□□□□ -2.17
CCNA1P78396 MIR544A-201ENST00000384855 91 ntBASIC1.48□□□□□ -2.17
CCNA1P78396 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.48□□□□□ -2.17
CCNA1P78396 BX295541.1-201ENST00000417774 250 ntBASIC1.48□□□□□ -2.17
CCNA1P78396 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.48□□□□□ -2.17
CCNA1P78396 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.48□□□□□ -2.17
CCNA1P78396 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.48□□□□□ -2.17
CCNA1P78396 SNORD42A-201ENST00000459584 64 ntBASIC1.48□□□□□ -2.17
CCNA1P78396 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.48□□□□□ -2.17
CCNA1P78396 RNU5F-2P-201ENST00000516066 82 ntBASIC1.48□□□□□ -2.17
CCNA1P78396 RNU6-902P-201ENST00000517212 91 ntBASIC1.48□□□□□ -2.17
CCNA1P78396 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.48□□□□□ -2.17
CCNA1P78396 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.48□□□□□ -2.17
CCNA1P78396 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.48□□□□□ -2.17
CCNA1P78396 MIR3136-201ENST00000583498 78 ntBASIC1.48□□□□□ -2.17
CCNA1P78396 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CCNA1P78396 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.48□□□□□ -2.17
CCNA1P78396 SNORD33-201ENST00000362761 85 ntBASIC1.47□□□□□ -2.17
CCNA1P78396 U3.4-201ENST00000363352 213 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms