Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC100830.2-201ENST00000581636 240 ntBASIC1.75□□□□□ -2.13
LIM2P55344 AL031274.2-201ENST00000599419 203 ntBASIC1.75□□□□□ -2.13
LIM2P55344 AC092954.2-201ENST00000609103 430 ntBASIC1.75□□□□□ -2.13
LIM2P55344 AL136221.1-201ENST00000621449 509 ntBASIC1.75□□□□□ -2.13
LIM2P55344 FER-210ENST00000628534 558 ntTSL 5 BASIC1.75□□□□□ -2.13
LIM2P55344 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.74□□□□□ -2.13
LIM2P55344 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LIM2P55344 Y_RNA.167-201ENST00000363735 109 ntBASIC1.74□□□□□ -2.13
LIM2P55344 RNU6-944P-201ENST00000364023 107 ntBASIC1.74□□□□□ -2.13
LIM2P55344 SNORD32B-201ENST00000364460 84 ntBASIC1.74□□□□□ -2.13
LIM2P55344 U3.13-201ENST00000364804 214 ntBASIC1.74□□□□□ -2.13
LIM2P55344 Y_RNA.378-201ENST00000365652 113 ntBASIC1.74□□□□□ -2.13
LIM2P55344 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
LIM2P55344 AC016907.1-201ENST00000419483 435 ntBASIC1.74□□□□□ -2.13
LIM2P55344 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.74□□□□□ -2.13
LIM2P55344 HMGN2P19-201ENST00000425149 265 ntBASIC1.74□□□□□ -2.13
LIM2P55344 MTCO1P20-201ENST00000425366 358 ntBASIC1.74□□□□□ -2.13
LIM2P55344 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.74□□□□□ -2.13
LIM2P55344 HMGN2P3-201ENST00000433603 273 ntBASIC1.74□□□□□ -2.13
LIM2P55344 HMGN2P5-201ENST00000436882 273 ntBASIC1.74□□□□□ -2.13
LIM2P55344 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.74□□□□□ -2.13
LIM2P55344 TRBVA-201ENST00000498804 316 ntBASIC1.74□□□□□ -2.13
LIM2P55344 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.74□□□□□ -2.13
LIM2P55344 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.74□□□□□ -2.13
LIM2P55344 AC107393.1-201ENST00000512403 346 ntBASIC1.74□□□□□ -2.13
LIM2P55344 RNU6-720P-201ENST00000516363 108 ntBASIC1.74□□□□□ -2.13
LIM2P55344 HSPE1P4-201ENST00000550617 308 ntBASIC1.74□□□□□ -2.13
LIM2P55344 MIR5694-201ENST00000581190 76 ntBASIC1.74□□□□□ -2.13
LIM2P55344 AC007229.1-201ENST00000590455 412 ntBASIC1.74□□□□□ -2.13
LIM2P55344 RPL17P51-201ENST00000605218 238 ntBASIC1.74□□□□□ -2.13
LIM2P55344 AC064807.4-201ENST00000607201 407 ntBASIC1.74□□□□□ -2.13
LIM2P55344 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LIM2P55344 OR4G1P-203ENST00000641984 1631 ntBASIC1.73□□□□□ -2.13
LIM2P55344 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
LIM2P55344 RNU4-15P-201ENST00000362613 141 ntBASIC1.73□□□□□ -2.13
LIM2P55344 RNU6-522P-201ENST00000364497 107 ntBASIC1.73□□□□□ -2.13
LIM2P55344 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
LIM2P55344 RNU6-1329P-201ENST00000365664 107 ntBASIC1.73□□□□□ -2.13
LIM2P55344 SNORD116-4-201ENST00000384733 96 ntBASIC1.73□□□□□ -2.13
LIM2P55344 MIR583-201ENST00000384846 75 ntBASIC1.73□□□□□ -2.13
LIM2P55344 U8.13-201ENST00000390842 128 ntBASIC1.73□□□□□ -2.13
LIM2P55344 Y_RNA.597-201ENST00000410463 100 ntBASIC1.73□□□□□ -2.13
LIM2P55344 SNRPEP10-201ENST00000420249 274 ntBASIC1.73□□□□□ -2.13
LIM2P55344 AL590135.1-201ENST00000422215 156 ntBASIC1.73□□□□□ -2.13
LIM2P55344 AC019205.3-201ENST00000424573 156 ntBASIC1.73□□□□□ -2.13
LIM2P55344 UBE2V1P4-201ENST00000425374 344 ntBASIC1.73□□□□□ -2.13
LIM2P55344 AC016700.2-201ENST00000446011 156 ntBASIC1.73□□□□□ -2.13
LIM2P55344 snoU13.26-201ENST00000459452 105 ntBASIC1.73□□□□□ -2.13
LIM2P55344 U8.21-201ENST00000459536 136 ntBASIC1.73□□□□□ -2.13
LIM2P55344 AC015911.1-201ENST00000495111 156 ntBASIC1.73□□□□□ -2.13
LIM2P55344 AC008628.2-201ENST00000502605 298 ntBASIC1.73□□□□□ -2.13
LIM2P55344 AC107953.1-201ENST00000522216 297 ntBASIC1.73□□□□□ -2.13
LIM2P55344 AP005597.4-201ENST00000526762 229 ntBASIC1.73□□□□□ -2.13
LIM2P55344 TRAV32-201ENST00000553993 340 ntBASIC1.73□□□□□ -2.13
LIM2P55344 ANP32BP3-201ENST00000559213 706 ntBASIC1.73□□□□□ -2.13
LIM2P55344 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.73□□□□□ -2.13
LIM2P55344 MIR3923-201ENST00000579521 83 ntBASIC1.73□□□□□ -2.13
LIM2P55344 MIR5692C1-201ENST00000585309 91 ntBASIC1.73□□□□□ -2.13
LIM2P55344 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.73□□□□□ -2.13
LIM2P55344 AP000654.2-201ENST00000605633 586 ntBASIC1.73□□□□□ -2.13
LIM2P55344 RNU6-89P-201ENST00000606519 100 ntBASIC1.73□□□□□ -2.13
LIM2P55344 MIR6840-201ENST00000611937 71 ntBASIC1.73□□□□□ -2.13
LIM2P55344 AC005520.5-201ENST00000613926 164 ntBASIC1.73□□□□□ -2.13
LIM2P55344 AL359314.1-201ENST00000616913 261 ntBASIC1.73□□□□□ -2.13
LIM2P55344 U4.5-201ENST00000617137 123 ntBASIC1.73□□□□□ -2.13
LIM2P55344 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
LIM2P55344 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
LIM2P55344 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
LIM2P55344 RNY3P3-201ENST00000363816 102 ntBASIC1.72□□□□□ -2.13
LIM2P55344 Y_RNA.372-201ENST00000365599 102 ntBASIC1.72□□□□□ -2.13
LIM2P55344 RNU6-128P-201ENST00000383976 107 ntBASIC1.72□□□□□ -2.13
LIM2P55344 RNU6-214P-201ENST00000384130 107 ntBASIC1.72□□□□□ -2.13
LIM2P55344 MIR9-3-201ENST00000385084 90 ntBASIC1.72□□□□□ -2.13
LIM2P55344 SNORA40.18-201ENST00000391200 128 ntBASIC1.72□□□□□ -2.13
LIM2P55344 MIR1294-201ENST00000408503 142 ntBASIC1.72□□□□□ -2.13
LIM2P55344 RNA5SP201-201ENST00000410316 124 ntBASIC1.72□□□□□ -2.13
LIM2P55344 AL121890.1-201ENST00000435457 205 ntBASIC1.72□□□□□ -2.13
LIM2P55344 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.72□□□□□ -2.13
LIM2P55344 MTND2P29-201ENST00000438595 412 ntBASIC1.72□□□□□ -2.13
LIM2P55344 GPM6BP3-201ENST00000442797 145 ntBASIC1.72□□□□□ -2.13
LIM2P55344 AC010095.1-201ENST00000443543 144 ntBASIC1.72□□□□□ -2.13
LIM2P55344 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.72□□□□□ -2.13
LIM2P55344 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.72□□□□□ -2.13
LIM2P55344 RPS29P11-201ENST00000496507 171 ntBASIC1.72□□□□□ -2.13
LIM2P55344 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.72□□□□□ -2.13
LIM2P55344 MTND1P5-201ENST00000517906 940 ntBASIC1.72□□□□□ -2.13
LIM2P55344 RNU6-323P-201ENST00000521915 107 ntBASIC1.72□□□□□ -2.13
LIM2P55344 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.72□□□□□ -2.13
LIM2P55344 AC109635.3-201ENST00000529536 185 ntBASIC1.72□□□□□ -2.13
LIM2P55344 SCOCP1-201ENST00000554676 349 ntBASIC1.72□□□□□ -2.13
LIM2P55344 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.72□□□□□ -2.13
LIM2P55344 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.72□□□□□ -2.13
LIM2P55344 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.72□□□□□ -2.13
LIM2P55344 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.72□□□□□ -2.13
LIM2P55344 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.72□□□□□ -2.13
LIM2P55344 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LIM2P55344 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.72□□□□□ -2.13
LIM2P55344 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LIM2P55344 MTND4P23-201ENST00000447723 1363 ntBASIC1.72□□□□□ -2.13
LIM2P55344 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms