Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
SMSP52788 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.96□□□□□ -2.1
SMSP52788 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
SMSP52788 Y_RNA.409-201ENST00000383990 98 ntBASIC1.96□□□□□ -2.1
SMSP52788 AC019129.1-201ENST00000403786 261 ntBASIC1.96□□□□□ -2.1
SMSP52788 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.96□□□□□ -2.1
SMSP52788 AL158823.1-201ENST00000418441 478 ntBASIC1.96□□□□□ -2.1
SMSP52788 AL353689.1-201ENST00000438895 199 ntBASIC1.96□□□□□ -2.1
SMSP52788 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.96□□□□□ -2.1
SMSP52788 AL021397.1-201ENST00000451806 248 ntBASIC1.96□□□□□ -2.1
SMSP52788 RNU6-1037P-201ENST00000459571 107 ntBASIC1.96□□□□□ -2.1
SMSP52788 AC008628.2-201ENST00000502605 298 ntBASIC1.96□□□□□ -2.1
SMSP52788 RNU6-965P-201ENST00000516721 96 ntBASIC1.96□□□□□ -2.1
SMSP52788 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.96□□□□□ -2.1
SMSP52788 AC016256.1-201ENST00000547971 354 ntBASIC1.96□□□□□ -2.1
SMSP52788 MIR3923-201ENST00000579521 83 ntBASIC1.96□□□□□ -2.1
SMSP52788 MIR5002-201ENST00000584713 97 ntBASIC1.96□□□□□ -2.1
SMSP52788 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.96□□□□□ -2.1
SMSP52788 AC008749.1-201ENST00000597650 306 ntBASIC1.96□□□□□ -2.1
SMSP52788 AL096840.1-201ENST00000603287 93 ntBASIC1.96□□□□□ -2.1
SMSP52788 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.96□□□□□ -2.1
SMSP52788 AL450472.1-202ENST00000637286 180 ntBASIC1.96□□□□□ -2.1
SMSP52788 AC121333.1-201ENST00000567488 2709 ntBASIC1.96□□□□□ -2.1
SMSP52788 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SMSP52788 AL356292.1-201ENST00000283110 373 ntBASIC1.95□□□□□ -2.1
SMSP52788 RNU6-1164P-201ENST00000364428 107 ntBASIC1.95□□□□□ -2.1
SMSP52788 RNU4-24P-201ENST00000364565 139 ntBASIC1.95□□□□□ -2.1
SMSP52788 RNA5SP138-201ENST00000365098 114 ntBASIC1.95□□□□□ -2.1
SMSP52788 SNORD37.1-201ENST00000390968 65 ntBASIC1.95□□□□□ -2.1
SMSP52788 CALM2P3-201ENST00000400429 449 ntBASIC1.95□□□□□ -2.1
SMSP52788 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.95□□□□□ -2.1
SMSP52788 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.95□□□□□ -2.1
SMSP52788 RPL23AP7-203ENST00000449021 469 ntBASIC1.95□□□□□ -2.1
SMSP52788 RNU6-1208P-201ENST00000459588 107 ntBASIC1.95□□□□□ -2.1
SMSP52788 RPL38P4-201ENST00000502376 214 ntBASIC1.95□□□□□ -2.1
SMSP52788 AC019235.1-201ENST00000503847 207 ntBASIC1.95□□□□□ -2.1
SMSP52788 AC093259.1-201ENST00000509755 300 ntBASIC1.95□□□□□ -2.1
SMSP52788 RNU6-567P-201ENST00000516746 107 ntBASIC1.95□□□□□ -2.1
SMSP52788 SNORA31.16-201ENST00000516773 139 ntBASIC1.95□□□□□ -2.1
SMSP52788 AL118558.2-201ENST00000556294 238 ntBASIC1.95□□□□□ -2.1
SMSP52788 AC021231.3-201ENST00000558497 370 ntBASIC1.95□□□□□ -2.1
SMSP52788 AC005520.5-201ENST00000613926 164 ntBASIC1.95□□□□□ -2.1
SMSP52788 AC005296.1-201ENST00000616145 209 ntBASIC1.95□□□□□ -2.1
SMSP52788 ZNF702P-202ENST00000434269 1966 ntBASIC1.95□□□□□ -2.1
SMSP52788 Y_RNA.167-201ENST00000363735 109 ntBASIC1.94□□□□□ -2.1
SMSP52788 RNU4-66P-201ENST00000365199 138 ntBASIC1.94□□□□□ -2.1
SMSP52788 RNU4-20P-201ENST00000365601 151 ntBASIC1.94□□□□□ -2.1
SMSP52788 RNU6-26P-201ENST00000383985 107 ntBASIC1.94□□□□□ -2.1
SMSP52788 Y_RNA.559-201ENST00000384686 107 ntBASIC1.94□□□□□ -2.1
SMSP52788 BTF3L4P2-201ENST00000392798 346 ntBASIC1.94□□□□□ -2.1
SMSP52788 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.94□□□□□ -2.1
SMSP52788 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.94□□□□□ -2.1
SMSP52788 MTND1P1-201ENST00000445453 368 ntBASIC1.94□□□□□ -2.1
SMSP52788 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.94□□□□□ -2.1
SMSP52788 HMGN2P23-201ENST00000456759 269 ntBASIC1.94□□□□□ -2.1
SMSP52788 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.94□□□□□ -2.1
SMSP52788 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.94□□□□□ -2.1
SMSP52788 SNORD60.2-201ENST00000516883 86 ntBASIC1.94□□□□□ -2.1
SMSP52788 RNU6-295P-201ENST00000516901 104 ntBASIC1.94□□□□□ -2.1
SMSP52788 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.94□□□□□ -2.1
SMSP52788 AP005597.4-201ENST00000526762 229 ntBASIC1.94□□□□□ -2.1
SMSP52788 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.94□□□□□ -2.1
SMSP52788 AC002984.1-201ENST00000591692 448 ntBASIC1.94□□□□□ -2.1
SMSP52788 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.94□□□□□ -2.1
SMSP52788 AL078605.1-201ENST00000603529 500 ntBASIC1.94□□□□□ -2.1
SMSP52788 AC092747.3-201ENST00000603769 301 ntBASIC1.94□□□□□ -2.1
SMSP52788 AC080013.6-201ENST00000606185 215 ntBASIC1.94□□□□□ -2.1
SMSP52788 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.94□□□□□ -2.1
SMSP52788 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SMSP52788 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SMSP52788 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SMSP52788 RNU1-58P-201ENST00000362413 163 ntBASIC1.93□□□□□ -2.1
SMSP52788 Y_RNA.378-201ENST00000365652 113 ntBASIC1.93□□□□□ -2.1
SMSP52788 SNORA67.3-201ENST00000384366 140 ntBASIC1.93□□□□□ -2.1
SMSP52788 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SMSP52788 SNORA26.9-201ENST00000391322 122 ntBASIC1.93□□□□□ -2.1
SMSP52788 AL357139.1-201ENST00000407792 426 ntBASIC1.93□□□□□ -2.1
SMSP52788 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.93□□□□□ -2.1
SMSP52788 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.93□□□□□ -2.1
SMSP52788 MTND3P21-201ENST00000433774 331 ntBASIC1.93□□□□□ -2.1
SMSP52788 MTND3P16-201ENST00000452205 344 ntBASIC1.93□□□□□ -2.1
SMSP52788 SNRPGP7-201ENST00000469016 106 ntBASIC1.93□□□□□ -2.1
SMSP52788 AC105313.1-201ENST00000509121 353 ntBASIC1.93□□□□□ -2.1
SMSP52788 SCARNA16.3-201ENST00000516595 184 ntBASIC1.93□□□□□ -2.1
SMSP52788 AP005639.2-201ENST00000527592 928 ntBASIC1.93□□□□□ -2.1
SMSP52788 AC087441.2-201ENST00000529141 262 ntBASIC1.93□□□□□ -2.1
SMSP52788 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.93□□□□□ -2.1
SMSP52788 MIR5692C1-201ENST00000585309 91 ntBASIC1.93□□□□□ -2.1
SMSP52788 PCGEM1.1-201ENST00000613431 131 ntBASIC1.93□□□□□ -2.1
SMSP52788 AL136221.1-201ENST00000621449 509 ntBASIC1.93□□□□□ -2.1
SMSP52788 SNORA43.4-201ENST00000629559 138 ntBASIC1.93□□□□□ -2.1
SMSP52788 AC068137.3-201ENST00000639191 341 ntBASIC1.93□□□□□ -2.1
SMSP52788 CENPCP1-201ENST00000533085 2578 ntBASIC1.93□□□□□ -2.1
SMSP52788 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SMSP52788 RNA5SP160-201ENST00000364866 120 ntBASIC1.92□□□□□ -2.1
SMSP52788 MIR676-201ENST00000390702 67 ntBASIC1.92□□□□□ -2.1
SMSP52788 EIF4E2P1-201ENST00000393781 255 ntBASIC1.92□□□□□ -2.1
SMSP52788 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.92□□□□□ -2.1
SMSP52788 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SMSP52788 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms