Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RNU6-621P-201ENST00000364752 109 ntBASIC0.2□□□□□ -2.38
GTF2A1P52655 RNU5E-6P-201ENST00000365574 115 ntBASIC0.2□□□□□ -2.38
GTF2A1P52655 SNORA40.2-201ENST00000390847 128 ntBASIC0.2□□□□□ -2.38
GTF2A1P52655 AC060773.1-201ENST00000421698 310 ntBASIC0.2□□□□□ -2.38
GTF2A1P52655 AC073614.1-201ENST00000438690 650 ntBASIC0.2□□□□□ -2.38
GTF2A1P52655 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
GTF2A1P52655 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.2□□□□□ -2.38
GTF2A1P52655 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.2□□□□□ -2.38
GTF2A1P52655 AC067942.3-201ENST00000512025 362 ntBASIC0.2□□□□□ -2.38
GTF2A1P52655 AC011406.1-201ENST00000512440 370 ntBASIC0.2□□□□□ -2.38
GTF2A1P52655 RNU6-1098P-201ENST00000516772 96 ntBASIC0.2□□□□□ -2.38
GTF2A1P52655 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.2□□□□□ -2.38
GTF2A1P52655 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.2□□□□□ -2.38
GTF2A1P52655 AC109446.1-201ENST00000566172 220 ntBASIC0.2□□□□□ -2.38
GTF2A1P52655 KC877982.1-201ENST00000602313 470 ntBASIC0.2□□□□□ -2.38
GTF2A1P52655 AL513534.2-201ENST00000603836 250 ntBASIC0.2□□□□□ -2.38
GTF2A1P52655 AC092574.1-201ENST00000609771 420 ntBASIC0.2□□□□□ -2.38
GTF2A1P52655 AC017083.3-201ENST00000609955 700 ntBASIC0.2□□□□□ -2.38
GTF2A1P52655 AC093913.1-201ENST00000614178 329 ntBASIC0.2□□□□□ -2.38
GTF2A1P52655 U6.42-201ENST00000618440 107 ntBASIC0.2□□□□□ -2.38
GTF2A1P52655 MIR6788-201ENST00000618842 66 ntBASIC0.2□□□□□ -2.38
GTF2A1P52655 RNU6-505P-201ENST00000384427 107 ntBASIC0.19□□□□□ -2.38
GTF2A1P52655 RNU1-119P-201ENST00000391122 165 ntBASIC0.19□□□□□ -2.38
GTF2A1P52655 GAPDHP17-201ENST00000449858 1001 ntBASIC0.19□□□□□ -2.38
GTF2A1P52655 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.19□□□□□ -2.38
GTF2A1P52655 AL162395.1-201ENST00000457882 422 ntBASIC0.19□□□□□ -2.38
GTF2A1P52655 RNU7-14P-201ENST00000459331 62 ntBASIC0.19□□□□□ -2.38
GTF2A1P52655 RNU7-21P-201ENST00000459430 62 ntBASIC0.19□□□□□ -2.38
GTF2A1P52655 AC104982.1-201ENST00000478775 574 ntBASIC0.19□□□□□ -2.38
GTF2A1P52655 HMGN1P12-201ENST00000499125 195 ntBASIC0.19□□□□□ -2.38
GTF2A1P52655 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.19□□□□□ -2.38
GTF2A1P52655 AL929325.1-201ENST00000603096 117 ntBASIC0.19□□□□□ -2.38
GTF2A1P52655 GHRLOS.1-201ENST00000610995 70 ntBASIC0.19□□□□□ -2.38
GTF2A1P52655 MIR6504-201ENST00000613520 61 ntBASIC0.19□□□□□ -2.38
GTF2A1P52655 MIR338-201ENST00000636369 67 ntBASIC0.19□□□□□ -2.38
GTF2A1P52655 SNORA72.2-201ENST00000365028 127 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 RNA5SP299-201ENST00000391203 116 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.18□□□□□ -2.38
GTF2A1P52655 RNA5SP201-201ENST00000410316 124 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 RNU4-22P-201ENST00000411058 166 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 ELOCP17-201ENST00000414751 326 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.18□□□□□ -2.38
GTF2A1P52655 UBE2D3P3-201ENST00000426992 425 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.18□□□□□ -2.38
GTF2A1P52655 RSL24D1P8-201ENST00000434442 492 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.18□□□□□ -2.38
GTF2A1P52655 AC010587.2-201ENST00000511727 448 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 AC027338.1-201ENST00000514840 825 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.18□□□□□ -2.38
GTF2A1P52655 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.18□□□□□ -2.38
GTF2A1P52655 MIR4452-201ENST00000583004 71 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 MIR548AC-201ENST00000585049 88 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 MIR4781-201ENST00000585250 76 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 DEFB131E-202ENST00000602581 683 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 AC080078.2-201ENST00000603766 501 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 AC012557.2-201ENST00000605919 418 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 AC116165.2-201ENST00000616705 206 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 AC026585.1-201ENST00000619582 524 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 FRG1KP-201ENST00000623592 341 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.18□□□□□ -2.38
GTF2A1P52655 AC006927.2-201ENST00000639256 389 ntBASIC0.18□□□□□ -2.38
GTF2A1P52655 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
GTF2A1P52655 RNU6-960P-201ENST00000364056 120 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 RNU6-877P-201ENST00000383868 107 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 RNU6-16P-201ENST00000384385 107 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 RNU6-1179P-201ENST00000384667 107 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 MIR578-201ENST00000384828 96 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 SNORD41-201ENST00000386967 70 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 RPL21P1-201ENST00000399532 476 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 AL031779.1-201ENST00000415663 330 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 USP9YP11-201ENST00000427537 717 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 RPL23AP30-201ENST00000432419 501 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.17□□□□□ -2.38
GTF2A1P52655 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.17□□□□□ -2.38
GTF2A1P52655 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.17□□□□□ -2.38
GTF2A1P52655 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.17□□□□□ -2.38
GTF2A1P52655 AC233266.1-201ENST00000454518 96 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.17□□□□□ -2.38
GTF2A1P52655 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.17□□□□□ -2.38
GTF2A1P52655 AC113347.3-201ENST00000509113 148 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 SNORA68.3-201ENST00000515906 83 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 RNU6-496P-201ENST00000516145 99 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 RN7SKP12-201ENST00000516275 143 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 ZNF321P-202ENST00000550843 495 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.17□□□□□ -2.38
GTF2A1P52655 AC008752.3-201ENST00000588113 712 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 AC242852.1-201ENST00000612151 96 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 AC136475.10-201ENST00000620253 385 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 AC244015.1-201ENST00000622301 99 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 AC097372.5-201ENST00000623665 376 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 AC103706.2-201ENST00000638080 240 ntBASIC0.17□□□□□ -2.38
GTF2A1P52655 RNU1-76P-201ENST00000362903 159 ntBASIC0.16□□□□□ -2.38
GTF2A1P52655 SNORA25.9-201ENST00000365087 128 ntBASIC0.16□□□□□ -2.38
GTF2A1P52655 RNY3P13-201ENST00000365542 102 ntBASIC0.16□□□□□ -2.38
GTF2A1P52655 VTRNA1-3-201ENST00000365645 89 ntBASIC0.16□□□□□ -2.38
GTF2A1P52655 RNU6-950P-201ENST00000384651 107 ntBASIC0.16□□□□□ -2.38
GTF2A1P52655 RNU6-1031P-201ENST00000384773 107 ntBASIC0.16□□□□□ -2.38
GTF2A1P52655 HIGD1AP15-201ENST00000416198 280 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms