Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 MTCO3P40-201ENST00000392516 676 ntBASIC1.95□□□□□ -2.1
GPC3P51654 MIR1283-2-201ENST00000408621 87 ntBASIC1.95□□□□□ -2.1
GPC3P51654 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.95□□□□□ -2.1
GPC3P51654 UBE2V1P4-201ENST00000425374 344 ntBASIC1.95□□□□□ -2.1
GPC3P51654 USP9YP14-201ENST00000430663 563 ntBASIC1.95□□□□□ -2.1
GPC3P51654 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.95□□□□□ -2.1
GPC3P51654 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.95□□□□□ -2.1
GPC3P51654 AC091885.1-201ENST00000506658 268 ntBASIC1.95□□□□□ -2.1
GPC3P51654 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.95□□□□□ -2.1
GPC3P51654 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.95□□□□□ -2.1
GPC3P51654 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.95□□□□□ -2.1
GPC3P51654 AC104383.1-201ENST00000530297 370 ntBASIC1.95□□□□□ -2.1
GPC3P51654 AC023050.3-201ENST00000541142 333 ntBASIC1.95□□□□□ -2.1
GPC3P51654 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.95□□□□□ -2.1
GPC3P51654 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.95□□□□□ -2.1
GPC3P51654 MIR4713-201ENST00000582691 75 ntBASIC1.95□□□□□ -2.1
GPC3P51654 VN1R107P-201ENST00000601784 209 ntBASIC1.95□□□□□ -2.1
GPC3P51654 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.95□□□□□ -2.1
GPC3P51654 uc_338.34-201ENST00000617467 174 ntBASIC1.95□□□□□ -2.1
GPC3P51654 U4.7-201ENST00000638126 106 ntBASIC1.95□□□□□ -2.1
GPC3P51654 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
GPC3P51654 RNU1-58P-201ENST00000362413 163 ntBASIC1.94□□□□□ -2.1
GPC3P51654 Y_RNA.99-201ENST00000363138 105 ntBASIC1.94□□□□□ -2.1
GPC3P51654 RNU6-82P-201ENST00000363970 107 ntBASIC1.94□□□□□ -2.1
GPC3P51654 SNORA16.2-201ENST00000390991 127 ntBASIC1.94□□□□□ -2.1
GPC3P51654 MTCYBP8-201ENST00000422855 651 ntBASIC1.94□□□□□ -2.1
GPC3P51654 VN1R108P-201ENST00000431580 830 ntBASIC1.94□□□□□ -2.1
GPC3P51654 AL606489.2-201ENST00000433886 234 ntBASIC1.94□□□□□ -2.1
GPC3P51654 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.94□□□□□ -2.1
GPC3P51654 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.94□□□□□ -2.1
GPC3P51654 RNU7-180P-201ENST00000459240 63 ntBASIC1.94□□□□□ -2.1
GPC3P51654 SNORD13-201ENST00000459299 104 ntBASIC1.94□□□□□ -2.1
GPC3P51654 RNU6-377P-201ENST00000515965 102 ntBASIC1.94□□□□□ -2.1
GPC3P51654 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
GPC3P51654 MIR4419B-201ENST00000577260 68 ntBASIC1.94□□□□□ -2.1
GPC3P51654 MIR4255-201ENST00000579351 72 ntBASIC1.94□□□□□ -2.1
GPC3P51654 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.94□□□□□ -2.1
GPC3P51654 AP000654.2-201ENST00000605633 586 ntBASIC1.94□□□□□ -2.1
GPC3P51654 HULC.1-201ENST00000612720 240 ntBASIC1.94□□□□□ -2.1
GPC3P51654 AC063943.3-201ENST00000615562 356 ntBASIC1.94□□□□□ -2.1
GPC3P51654 AL359880.1-201ENST00000621879 266 ntBASIC1.94□□□□□ -2.1
GPC3P51654 MIR544A-201ENST00000384855 91 ntBASIC1.93□□□□□ -2.1
GPC3P51654 RNU6-1106P-201ENST00000390845 107 ntBASIC1.93□□□□□ -2.1
GPC3P51654 SNORD37.1-201ENST00000390968 65 ntBASIC1.93□□□□□ -2.1
GPC3P51654 SNORA17.3-201ENST00000391159 129 ntBASIC1.93□□□□□ -2.1
GPC3P51654 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
GPC3P51654 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.93□□□□□ -2.1
GPC3P51654 AL353193.1-201ENST00000421444 268 ntBASIC1.93□□□□□ -2.1
GPC3P51654 RPL31P63-201ENST00000422565 375 ntBASIC1.93□□□□□ -2.1
GPC3P51654 AL645568.3-201ENST00000433683 316 ntBASIC1.93□□□□□ -2.1
GPC3P51654 IFNA20P-201ENST00000436840 528 ntBASIC1.93□□□□□ -2.1
GPC3P51654 AC007969.2-201ENST00000441891 191 ntBASIC1.93□□□□□ -2.1
GPC3P51654 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.93□□□□□ -2.1
GPC3P51654 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.93□□□□□ -2.1
GPC3P51654 RNA5SP458-201ENST00000516188 119 ntBASIC1.93□□□□□ -2.1
GPC3P51654 COPS8P3-201ENST00000526024 482 ntBASIC1.93□□□□□ -2.1
GPC3P51654 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.93□□□□□ -2.1
GPC3P51654 AC103591.3-201ENST00000608684 209 ntBASIC1.93□□□□□ -2.1
GPC3P51654 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.93□□□□□ -2.1
GPC3P51654 AC015540.1-201ENST00000615828 501 ntBASIC1.93□□□□□ -2.1
GPC3P51654 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.93□□□□□ -2.1
GPC3P51654 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.93□□□□□ -2.1
GPC3P51654 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
GPC3P51654 Y_RNA.436-201ENST00000384097 102 ntBASIC1.92□□□□□ -2.1
GPC3P51654 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.92□□□□□ -2.1
GPC3P51654 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.92□□□□□ -2.1
GPC3P51654 SNORA25.17-201ENST00000517184 124 ntBASIC1.92□□□□□ -2.1
GPC3P51654 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.92□□□□□ -2.1
GPC3P51654 AC245505.1-201ENST00000556398 224 ntBASIC1.92□□□□□ -2.1
GPC3P51654 AC103987.3-201ENST00000582071 292 ntBASIC1.92□□□□□ -2.1
GPC3P51654 AP000942.3-201ENST00000603702 160 ntBASIC1.92□□□□□ -2.1
GPC3P51654 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.92□□□□□ -2.1
GPC3P51654 RNU6-266P-201ENST00000364225 107 ntBASIC1.91□□□□□ -2.1
GPC3P51654 SNORD48-201ENST00000364953 64 ntBASIC1.91□□□□□ -2.1
GPC3P51654 RNU6-234P-201ENST00000365229 104 ntBASIC1.91□□□□□ -2.1
GPC3P51654 Y_RNA.517-201ENST00000384551 106 ntBASIC1.91□□□□□ -2.1
GPC3P51654 MIR597-201ENST00000384968 97 ntBASIC1.91□□□□□ -2.1
GPC3P51654 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
GPC3P51654 AC068050.1-201ENST00000394891 380 ntBASIC1.91□□□□□ -2.1
GPC3P51654 SNORD56-201ENST00000413522 71 ntBASIC1.91□□□□□ -2.1
GPC3P51654 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
GPC3P51654 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.91□□□□□ -2.1
GPC3P51654 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.91□□□□□ -2.1
GPC3P51654 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.91□□□□□ -2.1
GPC3P51654 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.91□□□□□ -2.1
GPC3P51654 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.91□□□□□ -2.1
GPC3P51654 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.91□□□□□ -2.1
GPC3P51654 MTCO3P38-201ENST00000468910 766 ntBASIC1.91□□□□□ -2.1
GPC3P51654 AC093259.1-201ENST00000509755 300 ntBASIC1.91□□□□□ -2.1
GPC3P51654 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.91□□□□□ -2.1
GPC3P51654 RNA5SP401-201ENST00000515920 127 ntBASIC1.91□□□□□ -2.1
GPC3P51654 Y_RNA.693-201ENST00000516641 110 ntBASIC1.91□□□□□ -2.1
GPC3P51654 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.91□□□□□ -2.1
GPC3P51654 GNAI2P1-201ENST00000541815 315 ntBASIC1.91□□□□□ -2.1
GPC3P51654 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.91□□□□□ -2.1
GPC3P51654 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.91□□□□□ -2.1
GPC3P51654 BNIP3P16-201ENST00000589779 534 ntBASIC1.91□□□□□ -2.1
GPC3P51654 AL356157.2-201ENST00000605122 111 ntBASIC1.91□□□□□ -2.1
GPC3P51654 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
GPC3P51654 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms