Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AC023824.2-201ENST00000566185 400 ntBASIC3.12□□□□□ -1.91
CLK3P49761 MIR4659A-201ENST00000580269 81 ntBASIC3.12□□□□□ -1.91
CLK3P49761 AC097372.5-201ENST00000623665 376 ntBASIC3.12□□□□□ -1.91
CLK3P49761 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CLK3P49761 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLK3P49761 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLK3P49761 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CLK3P49761 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.11□□□□□ -1.91
CLK3P49761 RNU4-90P-201ENST00000362773 141 ntBASIC3.11□□□□□ -1.91
CLK3P49761 RNU6-778P-201ENST00000363269 103 ntBASIC3.11□□□□□ -1.91
CLK3P49761 RNU6-336P-201ENST00000364891 107 ntBASIC3.11□□□□□ -1.91
CLK3P49761 RNU6-102P-201ENST00000384485 104 ntBASIC3.11□□□□□ -1.91
CLK3P49761 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CLK3P49761 BTF3L4P2-201ENST00000392798 346 ntBASIC3.11□□□□□ -1.91
CLK3P49761 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.11□□□□□ -1.91
CLK3P49761 RNU2-20P-201ENST00000410425 191 ntBASIC3.11□□□□□ -1.91
CLK3P49761 RNU6-1140P-201ENST00000410517 106 ntBASIC3.11□□□□□ -1.91
CLK3P49761 AC098614.2-201ENST00000426040 255 ntBASIC3.11□□□□□ -1.91
CLK3P49761 AC007560.1-201ENST00000426912 237 ntBASIC3.11□□□□□ -1.91
CLK3P49761 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.11□□□□□ -1.91
CLK3P49761 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.11□□□□□ -1.91
CLK3P49761 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.11□□□□□ -1.91
CLK3P49761 MTATP6P7-201ENST00000453315 681 ntBASIC3.11□□□□□ -1.91
CLK3P49761 snoU13.30-201ENST00000458951 104 ntBASIC3.11□□□□□ -1.91
CLK3P49761 RN7SL293P-201ENST00000481765 281 ntBASIC3.11□□□□□ -1.91
CLK3P49761 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.11□□□□□ -1.91
CLK3P49761 Y_RNA.683-201ENST00000516508 93 ntBASIC3.11□□□□□ -1.91
CLK3P49761 RNU6-572P-201ENST00000516724 80 ntBASIC3.11□□□□□ -1.91
CLK3P49761 RNU6-703P-201ENST00000516946 107 ntBASIC3.11□□□□□ -1.91
CLK3P49761 AC024405.2-202ENST00000532731 184 ntBASIC3.11□□□□□ -1.91
CLK3P49761 H3F3AP1-201ENST00000559984 334 ntBASIC3.11□□□□□ -1.91
CLK3P49761 Z83818.1-201ENST00000603584 150 ntBASIC3.11□□□□□ -1.91
CLK3P49761 AC012468.1-201ENST00000604888 430 ntBASIC3.11□□□□□ -1.91
CLK3P49761 MIR6075-201ENST00000620782 95 ntBASIC3.11□□□□□ -1.91
CLK3P49761 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CLK3P49761 U6.99-201ENST00000637524 83 ntBASIC3.11□□□□□ -1.91
CLK3P49761 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CLK3P49761 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLK3P49761 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
CLK3P49761 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.11□□□□□ -1.91
CLK3P49761 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLK3P49761 Z83843.1-201ENST00000604070 3685 ntBASIC3.1□□□□□ -1.91
CLK3P49761 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLK3P49761 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLK3P49761 Y_RNA.44-201ENST00000362676 108 ntBASIC3.1□□□□□ -1.91
CLK3P49761 Y_RNA.76-201ENST00000362931 109 ntBASIC3.1□□□□□ -1.91
CLK3P49761 RNU6-1159P-201ENST00000362933 107 ntBASIC3.1□□□□□ -1.91
CLK3P49761 Y_RNA.291-201ENST00000364886 113 ntBASIC3.1□□□□□ -1.91
CLK3P49761 MIR670-201ENST00000390142 98 ntBASIC3.1□□□□□ -1.91
CLK3P49761 AL031121.1-201ENST00000406553 254 ntBASIC3.1□□□□□ -1.91
CLK3P49761 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.1□□□□□ -1.91
CLK3P49761 NDUFS5P4-201ENST00000412983 318 ntBASIC3.1□□□□□ -1.91
CLK3P49761 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.1□□□□□ -1.91
CLK3P49761 AL358453.1-201ENST00000422522 250 ntBASIC3.1□□□□□ -1.91
CLK3P49761 AL606753.1-201ENST00000427435 87 ntBASIC3.1□□□□□ -1.91
CLK3P49761 AL078601.1-201ENST00000444542 271 ntBASIC3.1□□□□□ -1.91
CLK3P49761 TMSB4XP3-201ENST00000445144 114 ntBASIC3.1□□□□□ -1.91
CLK3P49761 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.1□□□□□ -1.91
CLK3P49761 HSPE1P25-201ENST00000455484 251 ntBASIC3.1□□□□□ -1.91
CLK3P49761 TOMM22P6-201ENST00000465035 409 ntBASIC3.1□□□□□ -1.91
CLK3P49761 RPS26P21-201ENST00000475397 348 ntBASIC3.1□□□□□ -1.91
CLK3P49761 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.1□□□□□ -1.91
CLK3P49761 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.1□□□□□ -1.91
CLK3P49761 SNORA31.18-201ENST00000517043 134 ntBASIC3.1□□□□□ -1.91
CLK3P49761 IGKV2-26-201ENST00000518305 343 ntBASIC3.1□□□□□ -1.91
CLK3P49761 MRPS36P4-201ENST00000534436 298 ntBASIC3.1□□□□□ -1.91
CLK3P49761 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.1□□□□□ -1.91
CLK3P49761 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.1□□□□□ -1.91
CLK3P49761 MIR3922-201ENST00000585192 84 ntBASIC3.1□□□□□ -1.91
CLK3P49761 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.1□□□□□ -1.91
CLK3P49761 AL133393.1-201ENST00000603277 287 ntBASIC3.1□□□□□ -1.91
CLK3P49761 AL713866.2-201ENST00000603579 219 ntBASIC3.1□□□□□ -1.91
CLK3P49761 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.1□□□□□ -1.91
CLK3P49761 AL356274.2-201ENST00000624379 3752 ntBASIC3.1□□□□□ -1.91
CLK3P49761 MAPK10-322ENST00000641485 4530 ntBASIC3.1□□□□□ -1.91
CLK3P49761 AL049781.1-201ENST00000623195 3585 ntBASIC3.1□□□□□ -1.91
CLK3P49761 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
CLK3P49761 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.09□□□□□ -1.91
CLK3P49761 AC233981.2-201ENST00000611524 1614 ntBASIC3.09□□□□□ -1.91
CLK3P49761 RNA5SP119-201ENST00000362715 117 ntBASIC3.09□□□□□ -1.91
CLK3P49761 RNU6-682P-201ENST00000363843 106 ntBASIC3.09□□□□□ -1.91
CLK3P49761 SNORA14A-201ENST00000364773 135 ntBASIC3.09□□□□□ -1.91
CLK3P49761 RNU6-658P-201ENST00000384606 106 ntBASIC3.09□□□□□ -1.91
CLK3P49761 MIR23B-201ENST00000384832 97 ntBASIC3.09□□□□□ -1.91
CLK3P49761 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CLK3P49761 U3.19-201ENST00000390893 196 ntBASIC3.09□□□□□ -1.91
CLK3P49761 SNORA53-201ENST00000391141 249 ntBASIC3.09□□□□□ -1.91
CLK3P49761 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.09□□□□□ -1.91
CLK3P49761 AC244505.4-201ENST00000434905 287 ntBASIC3.09□□□□□ -1.91
CLK3P49761 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.09□□□□□ -1.91
CLK3P49761 AL714022.1-201ENST00000439897 151 ntBASIC3.09□□□□□ -1.91
CLK3P49761 AC098831.1-201ENST00000440661 216 ntBASIC3.09□□□□□ -1.91
CLK3P49761 SSXP5-201ENST00000443473 287 ntBASIC3.09□□□□□ -1.91
CLK3P49761 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.09□□□□□ -1.91
CLK3P49761 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.09□□□□□ -1.91
CLK3P49761 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.09□□□□□ -1.91
CLK3P49761 AC087441.2-201ENST00000529141 262 ntBASIC3.09□□□□□ -1.91
CLK3P49761 NACAP3-201ENST00000552100 481 ntBASIC3.09□□□□□ -1.91
CLK3P49761 MIR4782-201ENST00000577987 79 ntBASIC3.09□□□□□ -1.91
CLK3P49761 MIR4429-201ENST00000580105 73 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 236.4 ms