Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC025465.4-201ENST00000513422 638 ntBASIC2.24□□□□□ -2.05
LHX1P48742 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.24□□□□□ -2.05
LHX1P48742 RN7SKP256-201ENST00000517201 314 ntBASIC2.24□□□□□ -2.05
LHX1P48742 IGLV3-17-201ENST00000519099 244 ntBASIC2.24□□□□□ -2.05
LHX1P48742 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.24□□□□□ -2.05
LHX1P48742 AC007375.1-201ENST00000554513 578 ntBASIC2.24□□□□□ -2.05
LHX1P48742 AL034555.1-201ENST00000604816 211 ntBASIC2.24□□□□□ -2.05
LHX1P48742 AC009033.1-201ENST00000624279 431 ntBASIC2.24□□□□□ -2.05
LHX1P48742 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LHX1P48742 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.24□□□□□ -2.05
LHX1P48742 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.24□□□□□ -2.05
LHX1P48742 AC092268.1-201ENST00000342691 405 ntBASIC2.23□□□□□ -2.05
LHX1P48742 RNU6-227P-201ENST00000362865 103 ntBASIC2.23□□□□□ -2.05
LHX1P48742 RNU1-23P-201ENST00000363361 144 ntBASIC2.23□□□□□ -2.05
LHX1P48742 SNORA32.2-201ENST00000384049 122 ntBASIC2.23□□□□□ -2.05
LHX1P48742 RNU6-933P-201ENST00000384424 107 ntBASIC2.23□□□□□ -2.05
LHX1P48742 Y_RNA.504-201ENST00000384481 104 ntBASIC2.23□□□□□ -2.05
LHX1P48742 RN7SKP158-201ENST00000410453 326 ntBASIC2.23□□□□□ -2.05
LHX1P48742 RNU6-325P-201ENST00000411132 105 ntBASIC2.23□□□□□ -2.05
LHX1P48742 AL030996.1-201ENST00000411430 235 ntBASIC2.23□□□□□ -2.05
LHX1P48742 HMGB3P2-201ENST00000411913 584 ntBASIC2.23□□□□□ -2.05
LHX1P48742 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.23□□□□□ -2.05
LHX1P48742 MTND3P9-201ENST00000429526 346 ntBASIC2.23□□□□□ -2.05
LHX1P48742 AL133396.1-201ENST00000432048 687 ntBASIC2.23□□□□□ -2.05
LHX1P48742 AL121890.1-201ENST00000435457 205 ntBASIC2.23□□□□□ -2.05
LHX1P48742 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LHX1P48742 AC009238.1-201ENST00000442165 424 ntBASIC2.23□□□□□ -2.05
LHX1P48742 AC009237.6-201ENST00000446969 424 ntBASIC2.23□□□□□ -2.05
LHX1P48742 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.23□□□□□ -2.05
LHX1P48742 AC104435.1-201ENST00000483483 166 ntBASIC2.23□□□□□ -2.05
LHX1P48742 AC069439.1-201ENST00000494739 167 ntBASIC2.23□□□□□ -2.05
LHX1P48742 AC114801.2-201ENST00000503825 781 ntBASIC2.23□□□□□ -2.05
LHX1P48742 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.23□□□□□ -2.05
LHX1P48742 AC091874.1-201ENST00000511402 339 ntBASIC2.23□□□□□ -2.05
LHX1P48742 AC018889.1-201ENST00000605372 397 ntBASIC2.23□□□□□ -2.05
LHX1P48742 AL138726.1-201ENST00000614873 333 ntBASIC2.23□□□□□ -2.05
LHX1P48742 Z82209.1-201ENST00000422141 2135 ntBASIC2.23□□□□□ -2.05
LHX1P48742 AC009541.1-201ENST00000438279 2662 ntBASIC2.23□□□□□ -2.05
LHX1P48742 Y_RNA.86-201ENST00000363020 111 ntBASIC2.22□□□□□ -2.05
LHX1P48742 RNU4-56P-201ENST00000364700 142 ntBASIC2.22□□□□□ -2.05
LHX1P48742 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LHX1P48742 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
LHX1P48742 AL079342.1-201ENST00000401460 267 ntBASIC2.22□□□□□ -2.05
LHX1P48742 AL445646.1-201ENST00000431784 216 ntBASIC2.22□□□□□ -2.05
LHX1P48742 snoU13.15-201ENST00000459407 104 ntBASIC2.22□□□□□ -2.05
LHX1P48742 YWHAEP4-201ENST00000505390 198 ntBASIC2.22□□□□□ -2.05
LHX1P48742 SNORA31.16-201ENST00000516773 139 ntBASIC2.22□□□□□ -2.05
LHX1P48742 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.22□□□□□ -2.05
LHX1P48742 AF235103.2-201ENST00000525753 346 ntBASIC2.22□□□□□ -2.05
LHX1P48742 AC121758.2-201ENST00000553271 193 ntBASIC2.22□□□□□ -2.05
LHX1P48742 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.22□□□□□ -2.05
LHX1P48742 MIR3672-201ENST00000584290 82 ntBASIC2.22□□□□□ -2.05
LHX1P48742 AC018638.8-201ENST00000588755 281 ntBASIC2.22□□□□□ -2.05
LHX1P48742 MIR6895-201ENST00000613497 78 ntBASIC2.22□□□□□ -2.05
LHX1P48742 AL136221.1-201ENST00000621449 509 ntBASIC2.22□□□□□ -2.05
LHX1P48742 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
LHX1P48742 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LHX1P48742 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LHX1P48742 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LHX1P48742 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LHX1P48742 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
LHX1P48742 SNORD114-1-201ENST00000362705 72 ntBASIC2.21□□□□□ -2.06
LHX1P48742 RNU6-562P-201ENST00000362731 107 ntBASIC2.21□□□□□ -2.06
LHX1P48742 Y_RNA.248-201ENST00000364501 109 ntBASIC2.21□□□□□ -2.06
LHX1P48742 RNU6-142P-201ENST00000384019 107 ntBASIC2.21□□□□□ -2.06
LHX1P48742 RNU1-52P-201ENST00000384190 164 ntBASIC2.21□□□□□ -2.06
LHX1P48742 RNU6-1148P-201ENST00000410992 104 ntBASIC2.21□□□□□ -2.06
LHX1P48742 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.21□□□□□ -2.06
LHX1P48742 AL645568.3-201ENST00000433683 316 ntBASIC2.21□□□□□ -2.06
LHX1P48742 USP9YP28-201ENST00000435142 589 ntBASIC2.21□□□□□ -2.06
LHX1P48742 GPM6BP3-201ENST00000442797 145 ntBASIC2.21□□□□□ -2.06
LHX1P48742 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.21□□□□□ -2.06
LHX1P48742 RPS29P27-201ENST00000463711 170 ntBASIC2.21□□□□□ -2.06
LHX1P48742 AC068781.1-201ENST00000488231 618 ntBASIC2.21□□□□□ -2.06
LHX1P48742 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.21□□□□□ -2.06
LHX1P48742 RNU6-273P-201ENST00000516937 96 ntBASIC2.21□□□□□ -2.06
LHX1P48742 PRELID2P1-201ENST00000552837 301 ntBASIC2.21□□□□□ -2.06
LHX1P48742 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.21□□□□□ -2.06
LHX1P48742 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.21□□□□□ -2.06
LHX1P48742 MIR5694-201ENST00000581190 76 ntBASIC2.21□□□□□ -2.06
LHX1P48742 MIR3942-201ENST00000585264 109 ntBASIC2.21□□□□□ -2.06
LHX1P48742 AC060780.3-201ENST00000589464 80 ntBASIC2.21□□□□□ -2.06
LHX1P48742 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.21□□□□□ -2.06
LHX1P48742 BNIP3P10-201ENST00000605360 577 ntBASIC2.21□□□□□ -2.06
LHX1P48742 AC063943.3-201ENST00000615562 356 ntBASIC2.21□□□□□ -2.06
LHX1P48742 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.21□□□□□ -2.06
LHX1P48742 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.21□□□□□ -2.06
LHX1P48742 AC080100.1-201ENST00000624239 5356 ntBASIC2.21□□□□□ -2.06
LHX1P48742 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
LHX1P48742 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LHX1P48742 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LHX1P48742 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LHX1P48742 ZNF355P-201ENST00000427301 3216 ntBASIC2.2□□□□□ -2.06
LHX1P48742 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.2□□□□□ -2.06
LHX1P48742 Y_RNA.135-201ENST00000363439 95 ntBASIC2.2□□□□□ -2.06
LHX1P48742 RNU6-944P-201ENST00000364023 107 ntBASIC2.2□□□□□ -2.06
LHX1P48742 Y_RNA.212-201ENST00000364177 102 ntBASIC2.2□□□□□ -2.06
LHX1P48742 SNORA25B-201ENST00000365507 128 ntBASIC2.2□□□□□ -2.06
LHX1P48742 RNU6-1013P-201ENST00000384180 107 ntBASIC2.2□□□□□ -2.06
LHX1P48742 RNU6-831P-201ENST00000384548 107 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 258.5 ms