Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RNU6-177P-201ENST00000411257 104 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 NFU1P2-201ENST00000448700 469 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 HMGB1P29-201ENST00000505659 499 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 MIR4782-201ENST00000577987 79 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 MIR548AX-201ENST00000580117 73 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 AL391001.1-201ENST00000602747 715 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 AL513534.2-201ENST00000603836 250 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 AC007363.1-201ENST00000604736 620 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.3□□□□□ -2.46
CLIP1P30622 AL390237.1-201ENST00000404226 1415 ntBASIC-0.31□□□□□ -2.46
CLIP1P30622 RNU6-858P-201ENST00000362436 107 ntBASIC-0.31□□□□□ -2.46
CLIP1P30622 SNORD116-23-201ENST00000384645 92 ntBASIC-0.31□□□□□ -2.46
CLIP1P30622 RN7SKP266-201ENST00000410232 287 ntBASIC-0.31□□□□□ -2.46
CLIP1P30622 RNA5SP266-201ENST00000410273 108 ntBASIC-0.31□□□□□ -2.46
CLIP1P30622 AC123900.1-201ENST00000420390 96 ntBASIC-0.31□□□□□ -2.46
CLIP1P30622 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.31□□□□□ -2.46
CLIP1P30622 RPS15AP10-201ENST00000432472 382 ntBASIC-0.31□□□□□ -2.46
CLIP1P30622 GTF2IP3-201ENST00000433887 494 ntBASIC-0.31□□□□□ -2.46
CLIP1P30622 MTND2P21-201ENST00000436242 1042 ntBASIC-0.31□□□□□ -2.46
CLIP1P30622 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.31□□□□□ -2.46
CLIP1P30622 BTF3P15-201ENST00000455606 336 ntBASIC-0.31□□□□□ -2.46
CLIP1P30622 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.31□□□□□ -2.46
CLIP1P30622 MTCO1P31-201ENST00000506355 492 ntBASIC-0.31□□□□□ -2.46
CLIP1P30622 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.31□□□□□ -2.46
CLIP1P30622 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.31□□□□□ -2.46
CLIP1P30622 MTCO3P28-201ENST00000513351 515 ntBASIC-0.31□□□□□ -2.46
CLIP1P30622 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.31□□□□□ -2.46
CLIP1P30622 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC-0.31□□□□□ -2.46
CLIP1P30622 SNORA59B-202ENST00000578183 701 ntBASIC-0.31□□□□□ -2.46
CLIP1P30622 uc_338.34-201ENST00000617467 174 ntBASIC-0.31□□□□□ -2.46
CLIP1P30622 AC078938.1-201ENST00000620993 318 ntBASIC-0.31□□□□□ -2.46
CLIP1P30622 SUGT1P1-201ENST00000379514 476 ntBASIC-0.32□□□□□ -2.46
CLIP1P30622 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
CLIP1P30622 RNU6-163P-201ENST00000384396 106 ntBASIC-0.32□□□□□ -2.46
CLIP1P30622 RNU6-1300P-201ENST00000391046 108 ntBASIC-0.32□□□□□ -2.46
CLIP1P30622 AL929288.2-201ENST00000446368 407 ntBASIC-0.32□□□□□ -2.46
CLIP1P30622 VN1R10P-201ENST00000447106 875 ntBASIC-0.32□□□□□ -2.46
CLIP1P30622 MED28P2-201ENST00000475771 317 ntBASIC-0.32□□□□□ -2.46
CLIP1P30622 RNU6-390P-201ENST00000516259 103 ntBASIC-0.32□□□□□ -2.46
CLIP1P30622 RPL23AP91-201ENST00000569211 455 ntBASIC-0.32□□□□□ -2.46
CLIP1P30622 MIR4742-201ENST00000581069 85 ntBASIC-0.32□□□□□ -2.46
CLIP1P30622 MIR3136-201ENST00000583498 78 ntBASIC-0.32□□□□□ -2.46
CLIP1P30622 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.32□□□□□ -2.46
CLIP1P30622 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-0.32□□□□□ -2.46
CLIP1P30622 AC106754.2-201ENST00000623006 233 ntBASIC-0.32□□□□□ -2.46
CLIP1P30622 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
CLIP1P30622 RNU6-619P-201ENST00000365146 108 ntBASIC-0.33□□□□□ -2.46
CLIP1P30622 RNU4-48P-201ENST00000365559 182 ntBASIC-0.33□□□□□ -2.46
CLIP1P30622 RNU6-48P-201ENST00000384161 107 ntBASIC-0.33□□□□□ -2.46
CLIP1P30622 MIR518A1-201ENST00000385068 85 ntBASIC-0.33□□□□□ -2.46
CLIP1P30622 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.33□□□□□ -2.46
CLIP1P30622 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-0.33□□□□□ -2.46
CLIP1P30622 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.33□□□□□ -2.46
CLIP1P30622 ARL5AP1-201ENST00000418991 388 ntBASIC-0.33□□□□□ -2.46
CLIP1P30622 RPL23AP50-201ENST00000434149 455 ntBASIC-0.33□□□□□ -2.46
CLIP1P30622 SNRPEP8-201ENST00000442866 260 ntBASIC-0.33□□□□□ -2.46
CLIP1P30622 AC104629.1-201ENST00000494226 508 ntBASIC-0.33□□□□□ -2.46
CLIP1P30622 AC027338.1-201ENST00000514840 825 ntBASIC-0.33□□□□□ -2.46
CLIP1P30622 BNIP3P30-201ENST00000601184 574 ntBASIC-0.33□□□□□ -2.46
CLIP1P30622 DPPA3P3-201ENST00000603842 430 ntBASIC-0.33□□□□□ -2.46
CLIP1P30622 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.33□□□□□ -2.46
CLIP1P30622 AL596245.1-201ENST00000618994 362 ntBASIC-0.33□□□□□ -2.46
CLIP1P30622 RNU6-654P-201ENST00000364373 107 ntBASIC-0.34□□□□□ -2.46
CLIP1P30622 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.34□□□□□ -2.46
CLIP1P30622 RNU6-505P-201ENST00000384427 107 ntBASIC-0.34□□□□□ -2.46
CLIP1P30622 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
CLIP1P30622 RNU2-28P-201ENST00000410457 189 ntBASIC-0.34□□□□□ -2.46
CLIP1P30622 MTATP6P27-201ENST00000416987 621 ntBASIC-0.34□□□□□ -2.46
CLIP1P30622 MTCO2P34-201ENST00000421994 607 ntBASIC-0.34□□□□□ -2.46
CLIP1P30622 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.34□□□□□ -2.46
CLIP1P30622 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.34□□□□□ -2.46
CLIP1P30622 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.34□□□□□ -2.46
CLIP1P30622 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.34□□□□□ -2.46
CLIP1P30622 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.34□□□□□ -2.46
CLIP1P30622 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.34□□□□□ -2.46
CLIP1P30622 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.34□□□□□ -2.46
CLIP1P30622 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.34□□□□□ -2.46
CLIP1P30622 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.34□□□□□ -2.46
CLIP1P30622 RNU6-885P-201ENST00000516607 104 ntBASIC-0.34□□□□□ -2.46
CLIP1P30622 AC093519.1-201ENST00000566109 298 ntBASIC-0.34□□□□□ -2.46
CLIP1P30622 AP001981.2-201ENST00000603241 418 ntBASIC-0.34□□□□□ -2.46
CLIP1P30622 AC019226.1-201ENST00000625666 515 ntBASIC-0.34□□□□□ -2.46
CLIP1P30622 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.34□□□□□ -2.46
CLIP1P30622 MTND4P5-201ENST00000435821 1374 ntBASIC-0.35□□□□□ -2.47
CLIP1P30622 RNU6-1078P-201ENST00000364522 103 ntBASIC-0.35□□□□□ -2.47
CLIP1P30622 SNORD49B-201ENST00000365172 72 ntBASIC-0.35□□□□□ -2.47
CLIP1P30622 SNORD41-201ENST00000386967 70 ntBASIC-0.35□□□□□ -2.47
CLIP1P30622 RNU6-564P-201ENST00000410983 104 ntBASIC-0.35□□□□□ -2.47
CLIP1P30622 AC104332.1-201ENST00000440471 797 ntBASIC-0.35□□□□□ -2.47
CLIP1P30622 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.35□□□□□ -2.47
CLIP1P30622 snoU13.25-201ENST00000458945 104 ntBASIC-0.35□□□□□ -2.47
CLIP1P30622 AP000797.1-201ENST00000478870 387 ntBASIC-0.35□□□□□ -2.47
CLIP1P30622 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.35□□□□□ -2.47
CLIP1P30622 AC048346.1-201ENST00000510247 144 ntBASIC-0.35□□□□□ -2.47
CLIP1P30622 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.35□□□□□ -2.47
CLIP1P30622 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.35□□□□□ -2.47
CLIP1P30622 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.35□□□□□ -2.47
CLIP1P30622 TPRKBP2-201ENST00000565969 475 ntBASIC-0.35□□□□□ -2.47
CLIP1P30622 AC023827.1-201ENST00000569247 97 ntBASIC-0.35□□□□□ -2.47
CLIP1P30622 AF038458.1-201ENST00000588406 262 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms