Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 MTND5P16-201ENST00000460269 1703 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
EPHA3P29320 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
EPHA3P29320 RNU1-35P-201ENST00000362782 153 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 SNORA70.4-201ENST00000365509 134 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 Y_RNA.424-201ENST00000384063 103 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 Y_RNA.455-201ENST00000384230 98 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 MIR628-201ENST00000385229 95 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 CYCSP48-201ENST00000417124 323 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 AC114482.1-201ENST00000418010 247 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 AIMP1P2-201ENST00000425294 312 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 U8.22-201ENST00000459141 133 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 AC091179.1-201ENST00000461606 579 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 RN7SL601P-201ENST00000471221 293 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 HMGB1P35-201ENST00000503360 598 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 MTND4LP22-201ENST00000508209 276 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.86□□□□□ -1.95
EPHA3P29320 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.86□□□□□ -1.95
EPHA3P29320 MIR4765-201ENST00000585007 77 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 AC023043.3-201ENST00000593113 385 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.86□□□□□ -1.95
EPHA3P29320 RMST_6.1-201ENST00000611980 203 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.86□□□□□ -1.95
EPHA3P29320 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
EPHA3P29320 AL359854.1-201ENST00000614203 1594 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 Z75746.1-201ENST00000440243 2080 ntBASIC2.86□□□□□ -1.95
EPHA3P29320 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
EPHA3P29320 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
EPHA3P29320 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
EPHA3P29320 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.85□□□□□ -1.95
EPHA3P29320 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.85□□□□□ -1.95
EPHA3P29320 SNORD115-32-201ENST00000364079 82 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
EPHA3P29320 U8.10-201ENST00000384260 133 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 RNU1-57P-201ENST00000384491 166 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 MIR153-2-201ENST00000385225 87 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 U3.19-201ENST00000390893 196 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 RNU6-823P-201ENST00000391042 103 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 SAR1AP2-201ENST00000392696 594 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 UBA52P6-201ENST00000399822 382 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 SNORD88.1-201ENST00000408684 91 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 RNU6-101P-201ENST00000410323 104 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 AC097463.2-201ENST00000421074 142 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 AC012306.1-201ENST00000423267 114 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 MTND5P22-201ENST00000458380 195 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 MTATP8P1-201ENST00000467115 207 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 AC117440.1-201ENST00000474107 571 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 ANXA2P1-201ENST00000505539 926 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 AC074250.1-201ENST00000511117 192 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 SNORA40.14-201ENST00000516543 86 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.85□□□□□ -1.95
EPHA3P29320 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.85□□□□□ -1.95
EPHA3P29320 AC113195.1-201ENST00000579952 141 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.85□□□□□ -1.95
EPHA3P29320 AL133393.1-201ENST00000603277 287 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 AC007179.3-201ENST00000604976 235 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 AL138825.1-201ENST00000618587 192 ntBASIC2.85□□□□□ -1.95
EPHA3P29320 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
EPHA3P29320 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.84□□□□□ -1.95
EPHA3P29320 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
EPHA3P29320 RNU6-655P-201ENST00000362858 107 ntBASIC2.84□□□□□ -1.95
EPHA3P29320 SNORD14.1-201ENST00000365609 90 ntBASIC2.84□□□□□ -1.95
EPHA3P29320 RNU6-1083P-201ENST00000384022 107 ntBASIC2.84□□□□□ -1.95
EPHA3P29320 RNU6-708P-201ENST00000384217 107 ntBASIC2.84□□□□□ -1.95
EPHA3P29320 Y_RNA.557-201ENST00000384680 107 ntBASIC2.84□□□□□ -1.95
EPHA3P29320 SNORA11.1-201ENST00000408133 129 ntBASIC2.84□□□□□ -1.95
EPHA3P29320 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.84□□□□□ -1.95
EPHA3P29320 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.84□□□□□ -1.95
EPHA3P29320 AL445305.1-201ENST00000432577 575 ntBASIC2.84□□□□□ -1.95
EPHA3P29320 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.84□□□□□ -1.95
EPHA3P29320 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.84□□□□□ -1.95
EPHA3P29320 RPL39P40-201ENST00000445481 146 ntBASIC2.84□□□□□ -1.95
EPHA3P29320 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.84□□□□□ -1.95
EPHA3P29320 snoU13.14-201ENST00000459372 104 ntBASIC2.84□□□□□ -1.95
EPHA3P29320 AP000870.1-201ENST00000472927 406 ntBASIC2.84□□□□□ -1.95
EPHA3P29320 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.84□□□□□ -1.95
EPHA3P29320 AC109329.1-201ENST00000518744 317 ntBASIC2.84□□□□□ -1.95
EPHA3P29320 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.84□□□□□ -1.95
EPHA3P29320 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
EPHA3P29320 AC040926.1-201ENST00000530195 238 ntBASIC2.84□□□□□ -1.95
EPHA3P29320 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.84□□□□□ -1.95
EPHA3P29320 MIR3136-201ENST00000583498 78 ntBASIC2.84□□□□□ -1.95
EPHA3P29320 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.84□□□□□ -1.95
EPHA3P29320 AC124312.5-201ENST00000604451 268 ntBASIC2.84□□□□□ -1.95
EPHA3P29320 AL034555.1-201ENST00000604816 211 ntBASIC2.84□□□□□ -1.95
EPHA3P29320 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.84□□□□□ -1.95
EPHA3P29320 AL078596.1-201ENST00000624856 447 ntBASIC2.84□□□□□ -1.95
EPHA3P29320 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.84□□□□□ -1.95
EPHA3P29320 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
EPHA3P29320 AL035425.3-201ENST00000564206 4996 ntBASIC2.83□□□□□ -1.96
EPHA3P29320 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
EPHA3P29320 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.83□□□□□ -1.96
EPHA3P29320 MIR208A-201ENST00000362287 71 ntBASIC2.83□□□□□ -1.96
EPHA3P29320 Y_RNA.153-201ENST00000363615 91 ntBASIC2.83□□□□□ -1.96
EPHA3P29320 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.83□□□□□ -1.96
EPHA3P29320 RNU6-541P-201ENST00000384709 110 ntBASIC2.83□□□□□ -1.96
EPHA3P29320 RNU4-47P-201ENST00000410876 114 ntBASIC2.83□□□□□ -1.96
EPHA3P29320 USP9YP16-201ENST00000430287 407 ntBASIC2.83□□□□□ -1.96
EPHA3P29320 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.83□□□□□ -1.96
EPHA3P29320 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms