Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNA5SP361-201ENST00000362686 118 ntBASIC4.29□□□□□ -1.72
RXRBP28702 RNU6-1130P-201ENST00000365434 107 ntBASIC4.29□□□□□ -1.72
RXRBP28702 RNU1-139P-201ENST00000391307 165 ntBASIC4.29□□□□□ -1.72
RXRBP28702 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.29□□□□□ -1.72
RXRBP28702 AC063976.3-201ENST00000426849 329 ntBASIC4.29□□□□□ -1.72
RXRBP28702 RPS15AP7-201ENST00000439294 405 ntBASIC4.29□□□□□ -1.72
RXRBP28702 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.29□□□□□ -1.72
RXRBP28702 RPL30P1-201ENST00000488676 339 ntBASIC4.29□□□□□ -1.72
RXRBP28702 AL160314.1-201ENST00000490836 438 ntBASIC4.29□□□□□ -1.72
RXRBP28702 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.29□□□□□ -1.72
RXRBP28702 SNORA31.19-201ENST00000517079 126 ntBASIC4.29□□□□□ -1.72
RXRBP28702 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RXRBP28702 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.29□□□□□ -1.72
RXRBP28702 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RXRBP28702 AC233981.2-201ENST00000611524 1614 ntBASIC4.28□□□□□ -1.72
RXRBP28702 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.28□□□□□ -1.72
RXRBP28702 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RXRBP28702 RNU6-1289P-201ENST00000384431 106 ntBASIC4.28□□□□□ -1.72
RXRBP28702 RNU6-1035P-201ENST00000384477 107 ntBASIC4.28□□□□□ -1.72
RXRBP28702 SNORA22C-201ENST00000384614 134 ntBASIC4.28□□□□□ -1.72
RXRBP28702 MIR3074-201ENST00000384885 81 ntBASIC4.28□□□□□ -1.72
RXRBP28702 RPL23AP36-201ENST00000413895 458 ntBASIC4.28□□□□□ -1.72
RXRBP28702 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.28□□□□□ -1.72
RXRBP28702 MTCO1P5-201ENST00000433573 344 ntBASIC4.28□□□□□ -1.72
RXRBP28702 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.28□□□□□ -1.72
RXRBP28702 HMGB1P22-201ENST00000505315 124 ntBASIC4.28□□□□□ -1.72
RXRBP28702 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RXRBP28702 Y_RNA.679-201ENST00000516416 91 ntBASIC4.28□□□□□ -1.72
RXRBP28702 SNORA27.4-201ENST00000516650 95 ntBASIC4.28□□□□□ -1.72
RXRBP28702 AP004371.1-201ENST00000525240 214 ntBASIC4.28□□□□□ -1.72
RXRBP28702 RPL21P9-201ENST00000556149 474 ntBASIC4.28□□□□□ -1.72
RXRBP28702 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.28□□□□□ -1.72
RXRBP28702 AC135776.4-201ENST00000624300 1904 ntBASIC4.28□□□□□ -1.72
RXRBP28702 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RXRBP28702 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.28□□□□□ -1.72
RXRBP28702 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RXRBP28702 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RXRBP28702 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RXRBP28702 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RXRBP28702 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RXRBP28702 DEFB108F-201ENST00000344638 222 ntBASIC4.27□□□□□ -1.73
RXRBP28702 SNORA25.1-201ENST00000362326 128 ntBASIC4.27□□□□□ -1.73
RXRBP28702 RNU6-78P-201ENST00000362897 107 ntBASIC4.27□□□□□ -1.73
RXRBP28702 RNU6-173P-201ENST00000364215 104 ntBASIC4.27□□□□□ -1.73
RXRBP28702 Y_RNA.570-201ENST00000384750 101 ntBASIC4.27□□□□□ -1.73
RXRBP28702 Y_RNA.580-201ENST00000391004 95 ntBASIC4.27□□□□□ -1.73
RXRBP28702 RNU6-131P-201ENST00000391144 107 ntBASIC4.27□□□□□ -1.73
RXRBP28702 SNORD12B-201ENST00000410433 91 ntBASIC4.27□□□□□ -1.73
RXRBP28702 FTH1P6-201ENST00000430768 320 ntBASIC4.27□□□□□ -1.73
RXRBP28702 AC011742.1-201ENST00000431448 434 ntBASIC4.27□□□□□ -1.73
RXRBP28702 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.27□□□□□ -1.73
RXRBP28702 AC092798.1-201ENST00000458542 409 ntBASIC4.27□□□□□ -1.73
RXRBP28702 AP000870.1-201ENST00000472927 406 ntBASIC4.27□□□□□ -1.73
RXRBP28702 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.27□□□□□ -1.73
RXRBP28702 AF186996.7-201ENST00000492781 209 ntBASIC4.27□□□□□ -1.73
RXRBP28702 RN7SKP209-201ENST00000516888 304 ntBASIC4.27□□□□□ -1.73
RXRBP28702 RN7SKP272-201ENST00000516988 232 ntBASIC4.27□□□□□ -1.73
RXRBP28702 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.27□□□□□ -1.73
RXRBP28702 RBBP8P1-201ENST00000449447 1844 ntBASIC4.27□□□□□ -1.73
RXRBP28702 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RXRBP28702 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RXRBP28702 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RXRBP28702 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
RXRBP28702 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RXRBP28702 MIR410-201ENST00000362222 80 ntBASIC4.26□□□□□ -1.73
RXRBP28702 Y_RNA.136-201ENST00000363444 102 ntBASIC4.26□□□□□ -1.73
RXRBP28702 SNORD115-32-201ENST00000364079 82 ntBASIC4.26□□□□□ -1.73
RXRBP28702 Y_RNA.308-201ENST00000365043 101 ntBASIC4.26□□□□□ -1.73
RXRBP28702 RNU5E-7P-201ENST00000365290 117 ntBASIC4.26□□□□□ -1.73
RXRBP28702 RNU5A-5P-201ENST00000411054 116 ntBASIC4.26□□□□□ -1.73
RXRBP28702 snoU109.2-201ENST00000459316 135 ntBASIC4.26□□□□□ -1.73
RXRBP28702 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.26□□□□□ -1.73
RXRBP28702 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.26□□□□□ -1.73
RXRBP28702 RNU6-991P-201ENST00000516168 107 ntBASIC4.26□□□□□ -1.73
RXRBP28702 SCARNA15.2-201ENST00000516409 127 ntBASIC4.26□□□□□ -1.73
RXRBP28702 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.26□□□□□ -1.73
RXRBP28702 KLKP1-201ENST00000595979 403 ntBASIC4.26□□□□□ -1.73
RXRBP28702 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.26□□□□□ -1.73
RXRBP28702 SNRPGP15-201ENST00000600149 222 ntBASIC4.26□□□□□ -1.73
RXRBP28702 AC037487.3-201ENST00000606668 112 ntBASIC4.26□□□□□ -1.73
RXRBP28702 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.26□□□□□ -1.73
RXRBP28702 RMST_6.1-201ENST00000611980 203 ntBASIC4.26□□□□□ -1.73
RXRBP28702 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RXRBP28702 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RXRBP28702 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RXRBP28702 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RXRBP28702 RNU6-105P-201ENST00000363909 104 ntBASIC4.25□□□□□ -1.73
RXRBP28702 RNU6-879P-201ENST00000364328 108 ntBASIC4.25□□□□□ -1.73
RXRBP28702 RNU6-629P-201ENST00000384061 103 ntBASIC4.25□□□□□ -1.73
RXRBP28702 RNU6-1168P-201ENST00000390831 104 ntBASIC4.25□□□□□ -1.73
RXRBP28702 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.25□□□□□ -1.73
RXRBP28702 AC096638.1-201ENST00000444678 216 ntBASIC4.25□□□□□ -1.73
RXRBP28702 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.25□□□□□ -1.73
RXRBP28702 AL031659.1-201ENST00000447075 539 ntBASIC4.25□□□□□ -1.73
RXRBP28702 HMGN2P21-201ENST00000447764 270 ntBASIC4.25□□□□□ -1.73
RXRBP28702 UQCRBP2-201ENST00000447827 297 ntBASIC4.25□□□□□ -1.73
RXRBP28702 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.25□□□□□ -1.73
RXRBP28702 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.25□□□□□ -1.73
RXRBP28702 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.25□□□□□ -1.73
RXRBP28702 AC140059.1-201ENST00000489238 361 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms