Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 U1.36-201ENST00000620684 176 ntBASIC2□□□□□ -2.09
RPA1P27694 AC024614.3-201ENST00000637860 256 ntBASIC2□□□□□ -2.09
RPA1P27694 AL359851.1-201ENST00000569460 4997 ntBASIC1.99□□□□□ -2.09
RPA1P27694 AC233981.2-201ENST00000611524 1614 ntBASIC1.99□□□□□ -2.09
RPA1P27694 RNU6-522P-201ENST00000364497 107 ntBASIC1.99□□□□□ -2.09
RPA1P27694 Y_RNA.324-201ENST00000365165 102 ntBASIC1.99□□□□□ -2.09
RPA1P27694 SNORA26.9-201ENST00000391322 122 ntBASIC1.99□□□□□ -2.09
RPA1P27694 RNU2-29P-201ENST00000410423 189 ntBASIC1.99□□□□□ -2.09
RPA1P27694 RNU2-40P-201ENST00000410833 196 ntBASIC1.99□□□□□ -2.09
RPA1P27694 HMGN2P19-201ENST00000425149 265 ntBASIC1.99□□□□□ -2.09
RPA1P27694 MTND1P34-201ENST00000438556 671 ntBASIC1.99□□□□□ -2.09
RPA1P27694 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.99□□□□□ -2.09
RPA1P27694 RPL23AP6-201ENST00000446637 472 ntBASIC1.99□□□□□ -2.09
RPA1P27694 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.99□□□□□ -2.09
RPA1P27694 RPL30P12-201ENST00000474666 353 ntBASIC1.99□□□□□ -2.09
RPA1P27694 RPS29P25-201ENST00000481709 171 ntBASIC1.99□□□□□ -2.09
RPA1P27694 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.99□□□□□ -2.09
RPA1P27694 RNU6-377P-201ENST00000515965 102 ntBASIC1.99□□□□□ -2.09
RPA1P27694 RNU6-1281P-201ENST00000516223 105 ntBASIC1.99□□□□□ -2.09
RPA1P27694 AL137161.1-201ENST00000532231 390 ntBASIC1.99□□□□□ -2.09
RPA1P27694 MIR4419B-201ENST00000577260 68 ntBASIC1.99□□□□□ -2.09
RPA1P27694 VN1R107P-201ENST00000601784 209 ntBASIC1.99□□□□□ -2.09
RPA1P27694 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.99□□□□□ -2.09
RPA1P27694 AC027514.1-201ENST00000588561 1603 ntBASIC1.99□□□□□ -2.09
RPA1P27694 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
RPA1P27694 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.98□□□□□ -2.09
RPA1P27694 CENPCP1-201ENST00000533085 2578 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-37P-201ENST00000362692 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-11P-201ENST00000364234 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-1322P-201ENST00000364309 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-25P-201ENST00000383873 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-1-201ENST00000383898 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-48P-201ENST00000384161 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-36P-201ENST00000384172 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 Y_RNA.450-201ENST00000384198 113 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-4P-201ENST00000384205 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-5P-201ENST00000384238 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-3P-201ENST00000384314 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-16P-201ENST00000384385 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-393P-201ENST00000384475 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-15P-201ENST00000384534 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-2-201ENST00000384627 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-29P-201ENST00000384637 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-9-201ENST00000384776 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-33P-201ENST00000384793 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 MIR514A2-201ENST00000385131 88 ntBASIC1.98□□□□□ -2.09
RPA1P27694 MIR514A3-201ENST00000385132 88 ntBASIC1.98□□□□□ -2.09
RPA1P27694 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RPA1P27694 AL356432.1-201ENST00000405809 419 ntBASIC1.98□□□□□ -2.09
RPA1P27694 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.98□□□□□ -2.09
RPA1P27694 UBE2V1P8-201ENST00000437166 265 ntBASIC1.98□□□□□ -2.09
RPA1P27694 AL121601.2-201ENST00000438019 707 ntBASIC1.98□□□□□ -2.09
RPA1P27694 PRPS1P1-201ENST00000445305 876 ntBASIC1.98□□□□□ -2.09
RPA1P27694 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.98□□□□□ -2.09
RPA1P27694 AL353752.1-201ENST00000454946 260 ntBASIC1.98□□□□□ -2.09
RPA1P27694 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.98□□□□□ -2.09
RPA1P27694 PRELID3BP1-201ENST00000457142 540 ntBASIC1.98□□□□□ -2.09
RPA1P27694 SNRPFP3-201ENST00000457792 225 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RPL23AP42-201ENST00000471152 471 ntBASIC1.98□□□□□ -2.09
RPA1P27694 AC083904.1-201ENST00000487828 231 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RN7SL274P-201ENST00000492268 272 ntBASIC1.98□□□□□ -2.09
RPA1P27694 AC116337.1-201ENST00000509680 687 ntBASIC1.98□□□□□ -2.09
RPA1P27694 PTP4A1P4-201ENST00000512479 322 ntBASIC1.98□□□□□ -2.09
RPA1P27694 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.98□□□□□ -2.09
RPA1P27694 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.98□□□□□ -2.09
RPA1P27694 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.98□□□□□ -2.09
RPA1P27694 MTND1P35-201ENST00000526739 508 ntBASIC1.98□□□□□ -2.09
RPA1P27694 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.98□□□□□ -2.09
RPA1P27694 AC090115.3-201ENST00000553218 849 ntBASIC1.98□□□□□ -2.09
RPA1P27694 MTCO3P23-201ENST00000561363 289 ntBASIC1.98□□□□□ -2.09
RPA1P27694 AC008749.1-201ENST00000597650 306 ntBASIC1.98□□□□□ -2.09
RPA1P27694 AL356157.2-201ENST00000605122 111 ntBASIC1.98□□□□□ -2.09
RPA1P27694 RNU6-6P-201ENST00000606623 107 ntBASIC1.98□□□□□ -2.09
RPA1P27694 Z82243.1-201ENST00000609432 473 ntBASIC1.98□□□□□ -2.09
RPA1P27694 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RPA1P27694 AC007014.2-201ENST00000615581 479 ntBASIC1.98□□□□□ -2.09
RPA1P27694 uc_338.34-201ENST00000617467 174 ntBASIC1.98□□□□□ -2.09
RPA1P27694 AC097372.5-201ENST00000623665 376 ntBASIC1.98□□□□□ -2.09
RPA1P27694 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.98□□□□□ -2.09
RPA1P27694 MIR3688-2-201ENST00000636963 87 ntBASIC1.98□□□□□ -2.09
RPA1P27694 MIR1321-201ENST00000637766 79 ntBASIC1.98□□□□□ -2.09
RPA1P27694 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.98□□□□□ -2.09
RPA1P27694 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
RPA1P27694 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
RPA1P27694 RNA5SP276-201ENST00000362580 94 ntBASIC1.97□□□□□ -2.09
RPA1P27694 RNU6-534P-201ENST00000364877 106 ntBASIC1.97□□□□□ -2.09
RPA1P27694 RNU4-66P-201ENST00000365199 138 ntBASIC1.97□□□□□ -2.09
RPA1P27694 RNU6-434P-201ENST00000384376 107 ntBASIC1.97□□□□□ -2.09
RPA1P27694 SNORD14D-201ENST00000384390 87 ntBASIC1.97□□□□□ -2.09
RPA1P27694 SNORD73A-201ENST00000386062 65 ntBASIC1.97□□□□□ -2.09
RPA1P27694 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RPA1P27694 AL606923.1-201ENST00000406616 190 ntBASIC1.97□□□□□ -2.09
RPA1P27694 EIF4EP2-201ENST00000422816 654 ntBASIC1.97□□□□□ -2.09
RPA1P27694 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.97□□□□□ -2.09
RPA1P27694 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.97□□□□□ -2.09
RPA1P27694 RPS15AP10-201ENST00000432472 382 ntBASIC1.97□□□□□ -2.09
RPA1P27694 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.97□□□□□ -2.09
RPA1P27694 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.97□□□□□ -2.09
RPA1P27694 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.97□□□□□ -2.09
RPA1P27694 AC132942.1-201ENST00000486753 483 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms