Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC007336.1-201ENST00000576365 3828 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 Y_RNA.65-201ENST00000362846 100 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 RNU6-227P-201ENST00000362865 103 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 Y_RNA.143-201ENST00000363520 106 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 SNORA12.2-201ENST00000391040 156 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 RPS12P23-201ENST00000419579 400 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 RPS29P6-201ENST00000438196 145 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 HSPE1P25-201ENST00000455484 251 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 AL139109.1-201ENST00000455491 297 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 RN7SL636P-201ENST00000497504 294 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR2AP24928 SNORA31.8-201ENST00000516327 108 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 RN7SKP49-201ENST00000516675 260 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.16□□□□□ -1.9
POLR2AP24928 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.16□□□□□ -1.9
POLR2AP24928 AC012433.1-201ENST00000588916 398 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.16□□□□□ -1.9
POLR2AP24928 U4.7-201ENST00000638126 106 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.16□□□□□ -1.9
POLR2AP24928 AC233981.2-201ENST00000611524 1614 ntBASIC3.16□□□□□ -1.9
POLR2AP24928 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.15□□□□□ -1.9
POLR2AP24928 AP000560.1-201ENST00000624150 1937 ntBASIC3.15□□□□□ -1.9
POLR2AP24928 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
POLR2AP24928 Y_RNA.33-201ENST00000362591 102 ntBASIC3.15□□□□□ -1.91
POLR2AP24928 RNU6-105P-201ENST00000363909 104 ntBASIC3.15□□□□□ -1.91
POLR2AP24928 RNU6-1303P-201ENST00000364841 107 ntBASIC3.15□□□□□ -1.91
POLR2AP24928 Y_RNA.416-201ENST00000384014 113 ntBASIC3.15□□□□□ -1.91
POLR2AP24928 MIR518D-201ENST00000385014 87 ntBASIC3.15□□□□□ -1.91
POLR2AP24928 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
POLR2AP24928 RNU2-25P-201ENST00000411041 191 ntBASIC3.15□□□□□ -1.91
POLR2AP24928 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.15□□□□□ -1.91
POLR2AP24928 AC096920.1-201ENST00000423991 241 ntBASIC3.15□□□□□ -1.91
POLR2AP24928 AC112220.1-201ENST00000434628 355 ntBASIC3.15□□□□□ -1.91
POLR2AP24928 RPL26P9-201ENST00000457466 433 ntBASIC3.15□□□□□ -1.91
POLR2AP24928 RNU6-138P-201ENST00000515952 107 ntBASIC3.15□□□□□ -1.91
POLR2AP24928 AC087441.2-201ENST00000529141 262 ntBASIC3.15□□□□□ -1.91
POLR2AP24928 AC068446.3-201ENST00000555285 382 ntBASIC3.15□□□□□ -1.91
POLR2AP24928 RMST_6.1-201ENST00000611980 203 ntBASIC3.15□□□□□ -1.91
POLR2AP24928 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.15□□□□□ -1.91
POLR2AP24928 AC008568.2-201ENST00000623862 2313 ntBASIC3.15□□□□□ -1.91
POLR2AP24928 AC007785.2-201ENST00000598627 1916 ntBASIC3.15□□□□□ -1.91
POLR2AP24928 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
POLR2AP24928 Y_RNA.277-201ENST00000364754 102 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 SNORD116-20-201ENST00000384529 92 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 MIR184-201ENST00000384962 84 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 SNORD78.2-201ENST00000391076 69 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR2AP24928 RPL23AP95-201ENST00000426806 265 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR2AP24928 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR2AP24928 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
POLR2AP24928 SNORA70.16-201ENST00000516390 95 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 RNA5SP468-201ENST00000516782 93 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.14□□□□□ -1.91
POLR2AP24928 AC104581.2-201ENST00000572227 430 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 MIR4643-201ENST00000577473 78 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 MIR3910-1-201ENST00000580936 111 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.14□□□□□ -1.91
POLR2AP24928 AC004792.1-201ENST00000614523 137 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.14□□□□□ -1.91
POLR2AP24928 AL360181.4-201ENST00000621752 134 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 AC090617.7-201ENST00000623952 126 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
POLR2AP24928 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
POLR2AP24928 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
POLR2AP24928 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
POLR2AP24928 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
POLR2AP24928 SNORD115-8-201ENST00000363856 82 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 SNORD115-38-201ENST00000365037 82 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 RNU6-1286P-201ENST00000383871 107 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 MIR548H3-201ENST00000408771 118 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 MIR1298-201ENST00000408783 112 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.14□□□□□ -1.91
POLR2AP24928 MTCO1P5-201ENST00000433573 344 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 AC243964.1-201ENST00000441814 261 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 AL392103.1-201ENST00000447000 198 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 FABP5P15-201ENST00000453566 214 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 RN7SL633P-201ENST00000488974 297 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 IGKV3-31-201ENST00000523109 329 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 AP004371.1-201ENST00000525240 214 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 AC090897.2-201ENST00000581715 130 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 AL390123.1-201ENST00000603216 237 ntBASIC3.14□□□□□ -1.91
POLR2AP24928 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
POLR2AP24928 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.14□□□□□ -1.91
POLR2AP24928 Z75746.1-201ENST00000440243 2080 ntBASIC3.13□□□□□ -1.91
POLR2AP24928 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
POLR2AP24928 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
POLR2AP24928 MIR10B-201ENST00000385011 110 ntBASIC3.13□□□□□ -1.91
POLR2AP24928 HIGD1AP2-201ENST00000446367 280 ntBASIC3.13□□□□□ -1.91
POLR2AP24928 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.13□□□□□ -1.91
POLR2AP24928 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.13□□□□□ -1.91
POLR2AP24928 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.13□□□□□ -1.91
POLR2AP24928 AP002392.1-201ENST00000537692 208 ntBASIC3.13□□□□□ -1.91
POLR2AP24928 AC021231.3-201ENST00000558497 370 ntBASIC3.13□□□□□ -1.91
POLR2AP24928 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.13□□□□□ -1.91
POLR2AP24928 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
POLR2AP24928 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
POLR2AP24928 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.13□□□□□ -1.91
POLR2AP24928 RNU6-1301P-201ENST00000362724 104 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 RNU6-78P-201ENST00000362897 107 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms