Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.49□□□□□ -1.85
VAMP1P23763 MTND4LP30-201ENST00000454092 297 ntBASIC3.49□□□□□ -1.85
VAMP1P23763 RNU6-1132P-201ENST00000459214 107 ntBASIC3.49□□□□□ -1.85
VAMP1P23763 RPL39P38-201ENST00000467018 153 ntBASIC3.49□□□□□ -1.85
VAMP1P23763 RPL31P61-201ENST00000496160 376 ntBASIC3.49□□□□□ -1.85
VAMP1P23763 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.49□□□□□ -1.85
VAMP1P23763 SNORA4.4-201ENST00000515921 135 ntBASIC3.49□□□□□ -1.85
VAMP1P23763 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.49□□□□□ -1.85
VAMP1P23763 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.49□□□□□ -1.85
VAMP1P23763 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.49□□□□□ -1.85
VAMP1P23763 MIR4423-201ENST00000580922 80 ntBASIC3.49□□□□□ -1.85
VAMP1P23763 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.49□□□□□ -1.85
VAMP1P23763 AC022441.3-201ENST00000605737 136 ntBASIC3.49□□□□□ -1.85
VAMP1P23763 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VAMP1P23763 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.49□□□□□ -1.85
VAMP1P23763 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VAMP1P23763 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
VAMP1P23763 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
VAMP1P23763 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.48□□□□□ -1.85
VAMP1P23763 Y_RNA.446-201ENST00000384178 104 ntBASIC3.48□□□□□ -1.85
VAMP1P23763 SNORA67.2-201ENST00000384300 149 ntBASIC3.48□□□□□ -1.85
VAMP1P23763 Y_RNA.476-201ENST00000384347 108 ntBASIC3.48□□□□□ -1.85
VAMP1P23763 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.48□□□□□ -1.85
VAMP1P23763 COX6B1P1-201ENST00000415962 213 ntBASIC3.48□□□□□ -1.85
VAMP1P23763 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.48□□□□□ -1.85
VAMP1P23763 HMGB3P17-201ENST00000504195 649 ntBASIC3.48□□□□□ -1.85
VAMP1P23763 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VAMP1P23763 ATP5LP3-201ENST00000514223 304 ntBASIC3.48□□□□□ -1.85
VAMP1P23763 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.48□□□□□ -1.85
VAMP1P23763 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.48□□□□□ -1.85
VAMP1P23763 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.48□□□□□ -1.85
VAMP1P23763 HMGN2P6-201ENST00000551091 273 ntBASIC3.48□□□□□ -1.85
VAMP1P23763 MIR1269B-201ENST00000580405 75 ntBASIC3.48□□□□□ -1.85
VAMP1P23763 snoZ196.1-201ENST00000625269 89 ntBASIC3.48□□□□□ -1.85
VAMP1P23763 AL034408.1-202ENST00000636088 415 ntBASIC3.48□□□□□ -1.85
VAMP1P23763 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VAMP1P23763 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
VAMP1P23763 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VAMP1P23763 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VAMP1P23763 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
VAMP1P23763 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VAMP1P23763 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VAMP1P23763 AC135776.4-201ENST00000624300 1904 ntBASIC3.47□□□□□ -1.85
VAMP1P23763 RNA5SP305-201ENST00000362665 119 ntBASIC3.47□□□□□ -1.85
VAMP1P23763 RNU6-472P-201ENST00000384299 107 ntBASIC3.47□□□□□ -1.85
VAMP1P23763 SNORD14D-201ENST00000384390 87 ntBASIC3.47□□□□□ -1.85
VAMP1P23763 RNU6-102P-201ENST00000384485 104 ntBASIC3.47□□□□□ -1.85
VAMP1P23763 RNU2-54P-201ENST00000410299 190 ntBASIC3.47□□□□□ -1.85
VAMP1P23763 RNU2-38P-201ENST00000410856 79 ntBASIC3.47□□□□□ -1.85
VAMP1P23763 AC016925.1-201ENST00000458303 298 ntBASIC3.47□□□□□ -1.85
VAMP1P23763 SNORD127-201ENST00000458892 86 ntBASIC3.47□□□□□ -1.85
VAMP1P23763 Y_RNA.668-201ENST00000516233 93 ntBASIC3.47□□□□□ -1.85
VAMP1P23763 RNU6-1338P-201ENST00000516328 91 ntBASIC3.47□□□□□ -1.85
VAMP1P23763 AP001781.1-201ENST00000530977 207 ntBASIC3.47□□□□□ -1.85
VAMP1P23763 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.47□□□□□ -1.85
VAMP1P23763 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.47□□□□□ -1.85
VAMP1P23763 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
VAMP1P23763 Y_RNA.54-201ENST00000362766 105 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 Y_RNA.101-201ENST00000363154 102 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 Y_RNA.237-201ENST00000364439 102 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 Y_RNA.350-201ENST00000365409 98 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VAMP1P23763 Y_RNA.383-201ENST00000383855 97 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 RNU6-418P-201ENST00000384035 107 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 RNU6-975P-201ENST00000384296 105 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 Y_RNA.541-201ENST00000384640 113 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 MIR548H3-201ENST00000408771 118 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 RN7SKP202-201ENST00000410439 330 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 AC016717.1-201ENST00000448918 286 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 RPL23AP3-201ENST00000453844 468 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 AC093259.1-201ENST00000509755 300 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 RPPH1-2P-201ENST00000516688 293 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 RNU2-31P-201ENST00000516954 155 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.46□□□□□ -1.86
VAMP1P23763 MIR3684-201ENST00000579779 74 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.46□□□□□ -1.86
VAMP1P23763 AL591424.2-201ENST00000617023 128 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 SDR42E1P4-201ENST00000620894 481 ntBASIC3.46□□□□□ -1.86
VAMP1P23763 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VAMP1P23763 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.46□□□□□ -1.86
VAMP1P23763 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VAMP1P23763 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VAMP1P23763 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.45□□□□□ -1.86
VAMP1P23763 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
VAMP1P23763 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
VAMP1P23763 MIR410-201ENST00000362222 80 ntBASIC3.45□□□□□ -1.86
VAMP1P23763 Y_RNA.286-201ENST00000364813 102 ntBASIC3.45□□□□□ -1.86
VAMP1P23763 MIR765-201ENST00000390226 114 ntBASIC3.45□□□□□ -1.86
VAMP1P23763 AC009963.1-201ENST00000417265 157 ntBASIC3.45□□□□□ -1.86
VAMP1P23763 AC245102.2-201ENST00000448956 180 ntBASIC3.45□□□□□ -1.86
VAMP1P23763 HSPE1P25-201ENST00000455484 251 ntBASIC3.45□□□□□ -1.86
VAMP1P23763 AF213884.1-201ENST00000488102 463 ntBASIC3.45□□□□□ -1.86
VAMP1P23763 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.45□□□□□ -1.86
VAMP1P23763 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.45□□□□□ -1.86
VAMP1P23763 AC055872.1-201ENST00000570978 278 ntBASIC3.45□□□□□ -1.86
VAMP1P23763 MIR6862-1-201ENST00000613016 70 ntBASIC3.45□□□□□ -1.86
VAMP1P23763 MIR6862-2-201ENST00000614755 70 ntBASIC3.45□□□□□ -1.86
VAMP1P23763 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
VAMP1P23763 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.45□□□□□ -1.86
VAMP1P23763 IPO8P1-201ENST00000455509 3109 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms