Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.27□□□□□ -2.05
BDNFP23560 ZNF720P1-201ENST00000562403 1939 ntBASIC2.27□□□□□ -2.05
BDNFP23560 RNU4-66P-201ENST00000365199 138 ntBASIC2.26□□□□□ -2.05
BDNFP23560 RNU4-26P-201ENST00000410270 107 ntBASIC2.26□□□□□ -2.05
BDNFP23560 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.26□□□□□ -2.05
BDNFP23560 AL353193.1-201ENST00000421444 268 ntBASIC2.26□□□□□ -2.05
BDNFP23560 TIMM9P3-201ENST00000428659 274 ntBASIC2.26□□□□□ -2.05
BDNFP23560 AL121890.1-201ENST00000435457 205 ntBASIC2.26□□□□□ -2.05
BDNFP23560 AC010095.1-201ENST00000443543 144 ntBASIC2.26□□□□□ -2.05
BDNFP23560 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
BDNFP23560 Y_RNA.654-201ENST00000497848 106 ntBASIC2.26□□□□□ -2.05
BDNFP23560 HMGB3P17-201ENST00000504195 649 ntBASIC2.26□□□□□ -2.05
BDNFP23560 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.26□□□□□ -2.05
BDNFP23560 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.26□□□□□ -2.05
BDNFP23560 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.26□□□□□ -2.05
BDNFP23560 AC010620.1-201ENST00000601088 1102 ntBASIC2.26□□□□□ -2.05
BDNFP23560 AC092747.3-201ENST00000603769 301 ntBASIC2.26□□□□□ -2.05
BDNFP23560 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.26□□□□□ -2.05
BDNFP23560 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
BDNFP23560 SNORA32.2-201ENST00000384049 122 ntBASIC2.25□□□□□ -2.05
BDNFP23560 AL079342.1-201ENST00000401460 267 ntBASIC2.25□□□□□ -2.05
BDNFP23560 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.25□□□□□ -2.05
BDNFP23560 RNU2-40P-201ENST00000410833 196 ntBASIC2.25□□□□□ -2.05
BDNFP23560 VN1R36P-201ENST00000414936 291 ntBASIC2.25□□□□□ -2.05
BDNFP23560 RPL7P54-201ENST00000438336 674 ntBASIC2.25□□□□□ -2.05
BDNFP23560 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.25□□□□□ -2.05
BDNFP23560 SRRM1P2-201ENST00000464531 1192 ntBASIC2.25□□□□□ -2.05
BDNFP23560 RPS23P5-201ENST00000495419 428 ntBASIC2.25□□□□□ -2.05
BDNFP23560 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.25□□□□□ -2.05
BDNFP23560 CCDC34P1-201ENST00000507441 517 ntBASIC2.25□□□□□ -2.05
BDNFP23560 RNU6-612P-201ENST00000516909 102 ntBASIC2.25□□□□□ -2.05
BDNFP23560 AC104383.1-201ENST00000530297 370 ntBASIC2.25□□□□□ -2.05
BDNFP23560 MIR3169-201ENST00000578032 83 ntBASIC2.25□□□□□ -2.05
BDNFP23560 NBR2-204ENST00000587322 63 ntBASIC2.25□□□□□ -2.05
BDNFP23560 AL590240.4-201ENST00000616908 390 ntBASIC2.25□□□□□ -2.05
BDNFP23560 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.25□□□□□ -2.05
BDNFP23560 MIR219B-201ENST00000637023 88 ntBASIC2.25□□□□□ -2.05
BDNFP23560 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.25□□□□□ -2.05
BDNFP23560 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
BDNFP23560 RNU6-1085P-201ENST00000363576 107 ntBASIC2.24□□□□□ -2.05
BDNFP23560 SNORD31B-201ENST00000364977 69 ntBASIC2.24□□□□□ -2.05
BDNFP23560 RNU6-214P-201ENST00000384130 107 ntBASIC2.24□□□□□ -2.05
BDNFP23560 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
BDNFP23560 SNORA48.3-201ENST00000391081 134 ntBASIC2.24□□□□□ -2.05
BDNFP23560 DEFB108C-201ENST00000400154 252 ntBASIC2.24□□□□□ -2.05
BDNFP23560 SRIP2-201ENST00000428470 166 ntBASIC2.24□□□□□ -2.05
BDNFP23560 RNU7-14P-201ENST00000459331 62 ntBASIC2.24□□□□□ -2.05
BDNFP23560 AC027575.1-201ENST00000481064 460 ntBASIC2.24□□□□□ -2.05
BDNFP23560 AC008834.1-201ENST00000511612 175 ntBASIC2.24□□□□□ -2.05
BDNFP23560 RNU6-405P-201ENST00000516637 110 ntBASIC2.24□□□□□ -2.05
BDNFP23560 RNU2-44P-201ENST00000516795 194 ntBASIC2.24□□□□□ -2.05
BDNFP23560 SNORD60.2-201ENST00000516883 86 ntBASIC2.24□□□□□ -2.05
BDNFP23560 SUMO2P18-201ENST00000518873 252 ntBASIC2.24□□□□□ -2.05
BDNFP23560 RNU6-323P-201ENST00000521915 107 ntBASIC2.24□□□□□ -2.05
BDNFP23560 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.24□□□□□ -2.05
BDNFP23560 IGKV3-31-201ENST00000523109 329 ntBASIC2.24□□□□□ -2.05
BDNFP23560 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.24□□□□□ -2.05
BDNFP23560 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.24□□□□□ -2.05
BDNFP23560 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.24□□□□□ -2.05
BDNFP23560 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.23□□□□□ -2.05
BDNFP23560 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.23□□□□□ -2.05
BDNFP23560 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.23□□□□□ -2.05
BDNFP23560 AC007395.1-201ENST00000451333 677 ntBASIC2.23□□□□□ -2.05
BDNFP23560 snoU13.15-201ENST00000459407 104 ntBASIC2.23□□□□□ -2.05
BDNFP23560 AC087884.1-201ENST00000469738 328 ntBASIC2.23□□□□□ -2.05
BDNFP23560 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.23□□□□□ -2.05
BDNFP23560 HSBP1P1-201ENST00000555205 166 ntBASIC2.23□□□□□ -2.05
BDNFP23560 AC090517.1-201ENST00000569307 266 ntBASIC2.23□□□□□ -2.05
BDNFP23560 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.23□□□□□ -2.05
BDNFP23560 AC009994.1-201ENST00000606889 253 ntBASIC2.23□□□□□ -2.05
BDNFP23560 AL357078.3-201ENST00000607528 618 ntBASIC2.23□□□□□ -2.05
BDNFP23560 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.23□□□□□ -2.05
BDNFP23560 AC098657.3-201ENST00000620434 263 ntBASIC2.23□□□□□ -2.05
BDNFP23560 MTND4P23-201ENST00000447723 1363 ntBASIC2.23□□□□□ -2.05
BDNFP23560 RNU6-378P-201ENST00000384324 107 ntBASIC2.22□□□□□ -2.05
BDNFP23560 AL030996.1-201ENST00000411430 235 ntBASIC2.22□□□□□ -2.05
BDNFP23560 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.22□□□□□ -2.05
BDNFP23560 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.22□□□□□ -2.05
BDNFP23560 snoU13.26-201ENST00000459452 105 ntBASIC2.22□□□□□ -2.05
BDNFP23560 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.22□□□□□ -2.05
BDNFP23560 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.22□□□□□ -2.05
BDNFP23560 SNORA19.2-201ENST00000516013 114 ntBASIC2.22□□□□□ -2.05
BDNFP23560 RNU6-1069P-201ENST00000516612 133 ntBASIC2.22□□□□□ -2.05
BDNFP23560 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.22□□□□□ -2.05
BDNFP23560 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.22□□□□□ -2.05
BDNFP23560 AC010900.2-201ENST00000604508 210 ntBASIC2.22□□□□□ -2.05
BDNFP23560 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.22□□□□□ -2.05
BDNFP23560 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
BDNFP23560 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
BDNFP23560 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
BDNFP23560 MIRLET7G-201ENST00000362280 84 ntBASIC2.21□□□□□ -2.06
BDNFP23560 Y_RNA.132-201ENST00000363421 102 ntBASIC2.21□□□□□ -2.06
BDNFP23560 SNORA69-201ENST00000383895 132 ntBASIC2.21□□□□□ -2.06
BDNFP23560 MIR30A-201ENST00000385092 71 ntBASIC2.21□□□□□ -2.06
BDNFP23560 RNU2-41P-201ENST00000410991 178 ntBASIC2.21□□□□□ -2.06
BDNFP23560 EBAG9P1-201ENST00000418955 543 ntBASIC2.21□□□□□ -2.06
BDNFP23560 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.21□□□□□ -2.06
BDNFP23560 AL359672.1-201ENST00000442302 409 ntBASIC2.21□□□□□ -2.06
BDNFP23560 AC007547.1-201ENST00000462177 490 ntBASIC2.21□□□□□ -2.06
BDNFP23560 AC026470.2-201ENST00000561492 181 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms