Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 RNU6-254P-201ENST00000363377 107 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 RNU6-1090P-201ENST00000364065 94 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 RNU6-1317P-201ENST00000364582 104 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 RNU6-234P-201ENST00000365229 104 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 MIR208B-201ENST00000401172 77 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 RNA5SP425-201ENST00000410336 112 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 AL030996.1-201ENST00000411430 235 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.41□□□□□ -2.02
CAPN3P20807 MTND3P9-201ENST00000429526 346 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 AL645568.3-201ENST00000433683 316 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.41□□□□□ -2.02
CAPN3P20807 AMD1P1-201ENST00000457220 922 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 AC096745.1-201ENST00000509945 370 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 AC092436.3-201ENST00000511788 257 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.41□□□□□ -2.02
CAPN3P20807 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.41□□□□□ -2.02
CAPN3P20807 EIF4A1P12-201ENST00000551910 141 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 AC015712.3-201ENST00000559380 164 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.41□□□□□ -2.02
CAPN3P20807 MIR4287-201ENST00000579398 78 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 MIR5694-201ENST00000581190 76 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 MIR6840-201ENST00000611937 71 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 PCGEM1.1-201ENST00000613431 131 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 AC005520.5-201ENST00000613926 164 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.41□□□□□ -2.02
CAPN3P20807 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.41□□□□□ -2.02
CAPN3P20807 XGY1-201ENST00000381172 446 ntBASIC2.4□□□□□ -2.03
CAPN3P20807 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CAPN3P20807 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.4□□□□□ -2.03
CAPN3P20807 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.4□□□□□ -2.03
CAPN3P20807 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.4□□□□□ -2.03
CAPN3P20807 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.4□□□□□ -2.03
CAPN3P20807 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.4□□□□□ -2.03
CAPN3P20807 AC093259.1-201ENST00000509755 300 ntBASIC2.4□□□□□ -2.03
CAPN3P20807 AC091874.1-201ENST00000511402 339 ntBASIC2.4□□□□□ -2.03
CAPN3P20807 RPL39P5-202ENST00000512505 151 ntBASIC2.4□□□□□ -2.03
CAPN3P20807 RNA5SP148-201ENST00000516527 94 ntBASIC2.4□□□□□ -2.03
CAPN3P20807 RNA5SP490-201ENST00000517141 136 ntBASIC2.4□□□□□ -2.03
CAPN3P20807 RNA5SP402-201ENST00000517148 110 ntBASIC2.4□□□□□ -2.03
CAPN3P20807 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.4□□□□□ -2.03
CAPN3P20807 CTHRC1P1-201ENST00000605383 469 ntBASIC2.4□□□□□ -2.03
CAPN3P20807 MIR8076-201ENST00000611401 83 ntBASIC2.4□□□□□ -2.03
CAPN3P20807 FAM157A-202ENST00000615155 405 ntBASIC2.4□□□□□ -2.03
CAPN3P20807 AC068137.4-201ENST00000638485 296 ntBASIC2.4□□□□□ -2.03
CAPN3P20807 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CAPN3P20807 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
CAPN3P20807 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
CAPN3P20807 ZNF72P-201ENST00000425869 1908 ntBASIC2.39□□□□□ -2.03
CAPN3P20807 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CAPN3P20807 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CAPN3P20807 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.39□□□□□ -2.03
CAPN3P20807 SNORD62.1-201ENST00000362541 86 ntBASIC2.39□□□□□ -2.03
CAPN3P20807 Y_RNA.453-201ENST00000384223 109 ntBASIC2.39□□□□□ -2.03
CAPN3P20807 Y_RNA.516-201ENST00000384541 124 ntBASIC2.39□□□□□ -2.03
CAPN3P20807 MIR17-201ENST00000385012 84 ntBASIC2.39□□□□□ -2.03
CAPN3P20807 SNORA12-201ENST00000391162 147 ntBASIC2.39□□□□□ -2.03
CAPN3P20807 AL512604.1-201ENST00000404812 257 ntBASIC2.39□□□□□ -2.03
CAPN3P20807 SNORA3.2-201ENST00000408221 125 ntBASIC2.39□□□□□ -2.03
CAPN3P20807 Y_RNA.615-201ENST00000410769 117 ntBASIC2.39□□□□□ -2.03
CAPN3P20807 RNU6-325P-201ENST00000411132 105 ntBASIC2.39□□□□□ -2.03
CAPN3P20807 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.39□□□□□ -2.03
CAPN3P20807 CR769767.1-201ENST00000436337 346 ntBASIC2.39□□□□□ -2.03
CAPN3P20807 AC108210.2-201ENST00000503681 201 ntBASIC2.39□□□□□ -2.03
CAPN3P20807 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.39□□□□□ -2.03
CAPN3P20807 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.39□□□□□ -2.03
CAPN3P20807 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.39□□□□□ -2.03
CAPN3P20807 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.39□□□□□ -2.03
CAPN3P20807 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.39□□□□□ -2.03
CAPN3P20807 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.39□□□□□ -2.03
CAPN3P20807 AL359314.1-201ENST00000616913 261 ntBASIC2.39□□□□□ -2.03
CAPN3P20807 MIR1248-201ENST00000629190 106 ntBASIC2.39□□□□□ -2.03
CAPN3P20807 SNORA43.4-201ENST00000629559 138 ntBASIC2.39□□□□□ -2.03
CAPN3P20807 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.39□□□□□ -2.03
CAPN3P20807 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
CAPN3P20807 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
CAPN3P20807 AC080100.1-201ENST00000624239 5356 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CAPN3P20807 Y_RNA.89-201ENST00000363031 102 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 Y_RNA.157-201ENST00000363638 102 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 MIR521-1-201ENST00000384902 87 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 RNU6-332P-201ENST00000391193 108 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 MIR1262-201ENST00000408276 93 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 VN1R36P-201ENST00000414936 291 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 RPS29P27-201ENST00000463711 170 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 RPS29P21-201ENST00000496272 170 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.38□□□□□ -2.03
CAPN3P20807 RNU6-991P-201ENST00000516168 107 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 SNORA31.11-201ENST00000516528 139 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.38□□□□□ -2.03
CAPN3P20807 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CAPN3P20807 MIR4648-201ENST00000580107 72 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 AL078605.1-201ENST00000603529 500 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 CYP2C61P-201ENST00000604072 290 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 AL022345.1-201ENST00000607292 135 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 AC137590.2-201ENST00000619709 240 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 SDR42E1P4-201ENST00000620894 481 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 AC130454.1-201ENST00000622948 401 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.38□□□□□ -2.03
CAPN3P20807 AC024614.3-201ENST00000637860 256 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms