Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.1□□□□□ -1.75
LMNB1P20700 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LMNB1P20700 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LMNB1P20700 SNORD81.1-201ENST00000363064 77 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 Y_RNA.277-201ENST00000364754 102 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 Y_RNA.462-201ENST00000384268 102 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 MIR10B-201ENST00000385011 110 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 MIR591-201ENST00000385290 95 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 RPS4XP3-201ENST00000398541 413 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.1□□□□□ -1.75
LMNB1P20700 ARF4P2-201ENST00000430209 526 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.1□□□□□ -1.75
LMNB1P20700 MTND5P15-201ENST00000434246 349 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 SUMO1P2-201ENST00000452524 304 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 AP000705.1-201ENST00000454567 350 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 HSPE1P25-201ENST00000455484 251 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 RNU6-1114P-201ENST00000516022 107 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 SCARNA24.2-201ENST00000516968 130 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.1□□□□□ -1.75
LMNB1P20700 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.1□□□□□ -1.75
LMNB1P20700 AC006199.1-201ENST00000548728 219 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 HSPE1P4-201ENST00000550617 308 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.1□□□□□ -1.75
LMNB1P20700 AC009163.5-201ENST00000575421 637 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 MIR4643-201ENST00000577473 78 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 AL365434.2-201ENST00000607979 234 ntBASIC4.1□□□□□ -1.75
LMNB1P20700 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
LMNB1P20700 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LMNB1P20700 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.1□□□□□ -1.75
LMNB1P20700 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LMNB1P20700 AC110491.1-201ENST00000562191 2010 ntBASIC4.09□□□□□ -1.75
LMNB1P20700 MAPK10-362ENST00000641864 4484 ntBASIC4.09□□□□□ -1.75
LMNB1P20700 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LMNB1P20700 Y_RNA.54-201ENST00000362766 105 ntBASIC4.09□□□□□ -1.75
LMNB1P20700 SNORD58.1-201ENST00000391313 66 ntBASIC4.09□□□□□ -1.75
LMNB1P20700 AL603908.1-201ENST00000406098 201 ntBASIC4.09□□□□□ -1.75
LMNB1P20700 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.09□□□□□ -1.75
LMNB1P20700 WARS2P1-201ENST00000429678 537 ntBASIC4.09□□□□□ -1.75
LMNB1P20700 HMGN2P20-201ENST00000437531 273 ntBASIC4.09□□□□□ -1.75
LMNB1P20700 AC096638.1-201ENST00000444678 216 ntBASIC4.09□□□□□ -1.75
LMNB1P20700 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.09□□□□□ -1.75
LMNB1P20700 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.09□□□□□ -1.75
LMNB1P20700 snoU13.6-201ENST00000458785 104 ntBASIC4.09□□□□□ -1.75
LMNB1P20700 RN7SL863P-201ENST00000462370 296 ntBASIC4.09□□□□□ -1.75
LMNB1P20700 RPS23P5-201ENST00000495419 428 ntBASIC4.09□□□□□ -1.75
LMNB1P20700 GZMAP1-201ENST00000503054 631 ntBASIC4.09□□□□□ -1.75
LMNB1P20700 SNORA31.6-201ENST00000516241 130 ntBASIC4.09□□□□□ -1.75
LMNB1P20700 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.09□□□□□ -1.75
LMNB1P20700 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.09□□□□□ -1.75
LMNB1P20700 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LMNB1P20700 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.09□□□□□ -1.76
LMNB1P20700 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMNB1P20700 Y_RNA.352-201ENST00000365439 102 ntBASIC4.08□□□□□ -1.76
LMNB1P20700 RNU4-70P-201ENST00000384579 139 ntBASIC4.08□□□□□ -1.76
LMNB1P20700 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LMNB1P20700 AL591034.1-201ENST00000407447 340 ntBASIC4.08□□□□□ -1.76
LMNB1P20700 SNORD12B-201ENST00000410433 91 ntBASIC4.08□□□□□ -1.76
LMNB1P20700 GPM6BP3-201ENST00000442797 145 ntBASIC4.08□□□□□ -1.76
LMNB1P20700 AL136097.1-201ENST00000456945 913 ntBASIC4.08□□□□□ -1.76
LMNB1P20700 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.08□□□□□ -1.76
LMNB1P20700 MIR4474-201ENST00000579189 78 ntBASIC4.08□□□□□ -1.76
LMNB1P20700 RNVU1-4-201ENST00000612985 164 ntBASIC4.08□□□□□ -1.76
LMNB1P20700 AC073308.1-201ENST00000623696 305 ntBASIC4.08□□□□□ -1.76
LMNB1P20700 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LMNB1P20700 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.08□□□□□ -1.76
LMNB1P20700 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LMNB1P20700 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
LMNB1P20700 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LMNB1P20700 CUL1P1-201ENST00000509510 2425 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LMNB1P20700 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.07□□□□□ -1.76
LMNB1P20700 FAM35BP-202ENST00000497389 3337 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
LMNB1P20700 RNU6-1266P-201ENST00000362794 105 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 Y_RNA.65-201ENST00000362846 100 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 RNA5SP197-201ENST00000363357 119 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 Y_RNA.274-201ENST00000364714 101 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 Y_RNA.286-201ENST00000364813 102 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 Y_RNA.319-201ENST00000365138 92 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 RNU6-1140P-201ENST00000410517 106 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 RNU6-1001P-201ENST00000411265 100 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 AC023141.4-201ENST00000412031 328 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.07□□□□□ -1.76
LMNB1P20700 AC005002.2-201ENST00000438228 269 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 MTND2P29-201ENST00000438595 412 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 AC084357.1-201ENST00000473404 255 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 RPL30P12-201ENST00000474666 353 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 RPL26P26-201ENST00000480251 434 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 RNA5SP356-201ENST00000515972 94 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 RNU5B-3P-201ENST00000516601 115 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 ACA59.2-201ENST00000517061 156 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LMNB1P20700 MIR3186-201ENST00000577404 85 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 MIR5695-201ENST00000579717 85 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 AL356157.2-201ENST00000605122 111 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.07□□□□□ -1.76
LMNB1P20700 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LMNB1P20700 ADAM3A-203ENST00000461344 2157 ntBASIC4.07□□□□□ -1.76
LMNB1P20700 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms