Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.47□□□□□ -1.85
PTPN1P18031 AC021231.3-201ENST00000558497 370 ntBASIC3.47□□□□□ -1.85
PTPN1P18031 MIR5195-201ENST00000583555 115 ntBASIC3.47□□□□□ -1.85
PTPN1P18031 YPEL5P2-201ENST00000605553 359 ntBASIC3.47□□□□□ -1.85
PTPN1P18031 AC068831.7-201ENST00000616954 363 ntBASIC3.47□□□□□ -1.85
PTPN1P18031 AC141273.2-201ENST00000618989 130 ntBASIC3.47□□□□□ -1.85
PTPN1P18031 AL450472.1-202ENST00000637286 180 ntBASIC3.47□□□□□ -1.85
PTPN1P18031 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.47□□□□□ -1.85
PTPN1P18031 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTPN1P18031 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTPN1P18031 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PTPN1P18031 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PTPN1P18031 SNORA38.1-201ENST00000364172 131 ntBASIC3.46□□□□□ -1.86
PTPN1P18031 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PTPN1P18031 RNU6-198P-201ENST00000384258 104 ntBASIC3.46□□□□□ -1.86
PTPN1P18031 MRPL35P1-201ENST00000404272 572 ntBASIC3.46□□□□□ -1.86
PTPN1P18031 AP000567.1-201ENST00000406413 156 ntBASIC3.46□□□□□ -1.86
PTPN1P18031 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.46□□□□□ -1.86
PTPN1P18031 AC096638.1-201ENST00000444678 216 ntBASIC3.46□□□□□ -1.86
PTPN1P18031 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.46□□□□□ -1.86
PTPN1P18031 AC006539.3-201ENST00000454258 129 ntBASIC3.46□□□□□ -1.86
PTPN1P18031 RNU7-23P-201ENST00000459465 62 ntBASIC3.46□□□□□ -1.86
PTPN1P18031 AC107626.1-201ENST00000471084 183 ntBASIC3.46□□□□□ -1.86
PTPN1P18031 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.46□□□□□ -1.86
PTPN1P18031 Y_RNA.673-201ENST00000516306 88 ntBASIC3.46□□□□□ -1.86
PTPN1P18031 SNORD19.2-201ENST00000516978 73 ntBASIC3.46□□□□□ -1.86
PTPN1P18031 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.46□□□□□ -1.86
PTPN1P18031 AL138963.2-201ENST00000605137 226 ntBASIC3.46□□□□□ -1.86
PTPN1P18031 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.46□□□□□ -1.86
PTPN1P18031 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.46□□□□□ -1.86
PTPN1P18031 AC005296.1-201ENST00000616145 209 ntBASIC3.46□□□□□ -1.86
PTPN1P18031 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.46□□□□□ -1.86
PTPN1P18031 MIR3651-201ENST00000630427 90 ntBASIC3.46□□□□□ -1.86
PTPN1P18031 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PTPN1P18031 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PTPN1P18031 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PTPN1P18031 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.45□□□□□ -1.86
PTPN1P18031 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.45□□□□□ -1.86
PTPN1P18031 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.45□□□□□ -1.86
PTPN1P18031 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTPN1P18031 MIR335-201ENST00000362173 94 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 RNU6-1159P-201ENST00000362933 107 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 RNU6-1285P-201ENST00000363480 105 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 RNU6-137P-201ENST00000363680 108 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 RNU6-926P-201ENST00000384075 107 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 MIR10B-201ENST00000385011 110 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 MIR483-201ENST00000385070 76 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 SNORA26.3-201ENST00000391119 136 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 MIR548H3-201ENST00000408771 118 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 RNA5SP38-201ENST00000410750 119 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.45□□□□□ -1.86
PTPN1P18031 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.45□□□□□ -1.86
PTPN1P18031 AC245291.1-201ENST00000419501 328 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 PTGES3P4-201ENST00000426243 356 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 AP002884.2-201ENST00000471647 395 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 HMGB1P35-201ENST00000503360 598 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 RNU6-1198P-201ENST00000516904 67 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 AC093331.1-201ENST00000521474 169 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PTPN1P18031 MIR5695-201ENST00000579717 85 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 AC091152.3-201ENST00000604227 325 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 AC099778.2-201ENST00000610904 211 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.45□□□□□ -1.86
PTPN1P18031 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PTPN1P18031 AC010680.1-201ENST00000590024 3590 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 AC002543.1-201ENST00000299783 1954 ntBASIC3.45□□□□□ -1.86
PTPN1P18031 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
PTPN1P18031 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PTPN1P18031 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTPN1P18031 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.44□□□□□ -1.86
PTPN1P18031 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.44□□□□□ -1.86
PTPN1P18031 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.44□□□□□ -1.86
PTPN1P18031 AL391987.6-201ENST00000305671 199 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 RNA5SP361-201ENST00000362686 118 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 SNORD81.1-201ENST00000363064 77 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 Y_RNA.237-201ENST00000364439 102 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 RNU6-19P-201ENST00000384718 107 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 MIR487A-201ENST00000385009 80 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 MIR591-201ENST00000385290 95 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 RNU6-159P-201ENST00000391080 106 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 RNU2-20P-201ENST00000410425 191 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 SNORD12B-201ENST00000410433 91 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 RNU2-49P-201ENST00000410666 184 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 RNA5SP229-201ENST00000410809 99 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 RNU4-47P-201ENST00000410876 114 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 WARS2P1-201ENST00000429678 537 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 snoU13.6-201ENST00000458785 104 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 RN7SL504P-201ENST00000494496 287 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 SNORA31.6-201ENST00000516241 130 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 RNU6-58P-201ENST00000517143 103 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 UBL5P4-201ENST00000562584 236 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 MIR2682-201ENST00000580305 110 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.44□□□□□ -1.86
PTPN1P18031 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.44□□□□□ -1.86
PTPN1P18031 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTPN1P18031 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PTPN1P18031 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.43□□□□□ -1.86
PTPN1P18031 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.43□□□□□ -1.86
PTPN1P18031 AC007256.1-201ENST00000392253 2765 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms