Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC096576.1-201ENST00000489014 359 ntBASIC2.4□□□□□ -2.03
HLA-DOBP13765 RPL22P13-201ENST00000493291 347 ntBASIC2.4□□□□□ -2.03
HLA-DOBP13765 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DOBP13765 MRPS36P2-201ENST00000512569 299 ntBASIC2.4□□□□□ -2.03
HLA-DOBP13765 Y_RNA.661-201ENST00000516003 99 ntBASIC2.4□□□□□ -2.03
HLA-DOBP13765 RN7SKP295-201ENST00000517264 153 ntBASIC2.4□□□□□ -2.03
HLA-DOBP13765 SCARNA11.3-201ENST00000517276 130 ntBASIC2.4□□□□□ -2.03
HLA-DOBP13765 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.4□□□□□ -2.03
HLA-DOBP13765 AC079598.5-201ENST00000547460 117 ntBASIC2.4□□□□□ -2.03
HLA-DOBP13765 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.4□□□□□ -2.03
HLA-DOBP13765 AC021231.3-201ENST00000558497 370 ntBASIC2.4□□□□□ -2.03
HLA-DOBP13765 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DOBP13765 AC004584.2-201ENST00000570407 410 ntBASIC2.4□□□□□ -2.03
HLA-DOBP13765 MIR5571-201ENST00000577998 113 ntBASIC2.4□□□□□ -2.03
HLA-DOBP13765 AC022432.1-201ENST00000595739 310 ntBASIC2.4□□□□□ -2.03
HLA-DOBP13765 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.4□□□□□ -2.03
HLA-DOBP13765 AL137843.1-201ENST00000605078 385 ntBASIC2.4□□□□□ -2.03
HLA-DOBP13765 MIR6733-201ENST00000635723 61 ntBASIC2.4□□□□□ -2.03
HLA-DOBP13765 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DOBP13765 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DOBP13765 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DOBP13765 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.39□□□□□ -2.03
HLA-DOBP13765 Y_RNA.132-201ENST00000363421 102 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 RNU6-99P-201ENST00000364721 107 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 AC117470.1-201ENST00000381974 330 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 Y_RNA.422-201ENST00000384054 114 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 RNU6-308P-201ENST00000390957 107 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 MCFD2P1-201ENST00000417812 300 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 RPL23AP83-201ENST00000434984 473 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.39□□□□□ -2.03
HLA-DOBP13765 AL353705.4-201ENST00000449661 238 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 SEM1P1-201ENST00000506694 209 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 SNORA31.6-201ENST00000516241 130 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 SCARNA15.1-201ENST00000516384 125 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 RNU7-4P-201ENST00000516961 62 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DOBP13765 CBX3P7-201ENST00000532876 502 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 MRPS36P4-201ENST00000534436 298 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 AC104581.2-201ENST00000572227 430 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 MIR4635-201ENST00000583759 79 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 AC008739.2-201ENST00000597006 317 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 RPL23AP88-201ENST00000605759 454 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 AL359198.2-201ENST00000611836 194 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 AC083806.3-201ENST00000614016 455 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.39□□□□□ -2.03
HLA-DOBP13765 AC137590.2-201ENST00000619709 240 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 AC006386.2-201ENST00000624491 75 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 AC012005.1-201ENST00000624575 75 ntBASIC2.39□□□□□ -2.03
HLA-DOBP13765 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.39□□□□□ -2.03
HLA-DOBP13765 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
HLA-DOBP13765 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.39□□□□□ -2.03
HLA-DOBP13765 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
HLA-DOBP13765 RNU6-212P-201ENST00000362642 104 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 RNU5B-2P-201ENST00000363036 113 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 SNORD115-32-201ENST00000364079 82 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 Y_RNA.216-201ENST00000364205 93 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 SNORA33.2-201ENST00000365413 134 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 U8.9-201ENST00000365667 134 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 SNORA22B-201ENST00000383876 138 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 SNORA29-201ENST00000384183 140 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 Y_RNA.496-201ENST00000384444 101 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 MIR625-201ENST00000385047 85 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 RNU6-1156P-201ENST00000410365 100 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 AC104332.2-201ENST00000429959 156 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.38□□□□□ -2.03
HLA-DOBP13765 AC105272.1-201ENST00000438604 198 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 AC025750.2-201ENST00000442609 450 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DOBP13765 RPL39P40-201ENST00000445481 146 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 MTND4P19-201ENST00000446659 478 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 GSTA11P-201ENST00000452866 669 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DOBP13765 AC112771.1-201ENST00000463581 102 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 RN7SL499P-201ENST00000481141 276 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DOBP13765 RPL30P1-201ENST00000488676 339 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 RPL23AP75-201ENST00000491601 451 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DOBP13765 RNU7-175P-201ENST00000515915 61 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 SCARNA17.1-201ENST00000516211 143 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 SCARNA17.2-201ENST00000516334 143 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DOBP13765 MIR3136-201ENST00000583498 78 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DOBP13765 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DOBP13765 AC073410.2-201ENST00000603240 332 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DOBP13765 SCARNA17.4-201ENST00000614296 143 ntBASIC2.38□□□□□ -2.03
HLA-DOBP13765 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DOBP13765 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DOBP13765 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DOBP13765 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DOBP13765 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
HLA-DOBP13765 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
HLA-DOBP13765 Y_RNA.148-201ENST00000363557 117 ntBASIC2.37□□□□□ -2.03
HLA-DOBP13765 Y_RNA.314-201ENST00000365114 102 ntBASIC2.37□□□□□ -2.03
HLA-DOBP13765 RNU6-1032P-201ENST00000384100 107 ntBASIC2.37□□□□□ -2.03
HLA-DOBP13765 RNY1P14-201ENST00000384426 108 ntBASIC2.37□□□□□ -2.03
HLA-DOBP13765 RNU1-57P-201ENST00000384491 166 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms