Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL6A2P12110 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL6A2P12110 AL021368.2-201ENST00000606125 5352 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL6A2P12110 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL6A2P12110 AC017071.1-201ENST00000564407 2204 ntBASIC3.46□□□□□ -1.86
COL6A2P12110 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.45□□□□□ -1.86
COL6A2P12110 AC103988.1-201ENST00000566382 2177 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL6A2P12110 AC007496.3-201ENST00000624987 3443 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 AC010889.1-201ENST00000566193 2666 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 GABRG2-229ENST00000641017 3628 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 RNU5F-3P-201ENST00000363767 117 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 MIR487A-201ENST00000385009 80 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 RNU6-750P-201ENST00000390946 107 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 RNU2-20P-201ENST00000410425 191 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 RNU5A-5P-201ENST00000411054 116 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 AC019205.3-201ENST00000424573 156 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.45□□□□□ -1.86
COL6A2P12110 AC005002.2-201ENST00000438228 269 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.45□□□□□ -1.86
COL6A2P12110 AL441985.1-201ENST00000457727 251 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 SNORD105B-201ENST00000458770 79 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 CENPBD1P1-201ENST00000464061 469 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 AIG1P1-201ENST00000503376 148 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 MIR2276-201ENST00000516886 89 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.45□□□□□ -1.86
COL6A2P12110 AC107934.2-201ENST00000518653 310 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 UBL5P4-201ENST00000562584 236 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 AC105137.2-201ENST00000569073 466 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 MIR5695-201ENST00000579717 85 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 AC005520.5-201ENST00000613926 164 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 AC127459.3-201ENST00000624328 466 ntBASIC3.45□□□□□ -1.86
COL6A2P12110 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.45□□□□□ -1.86
COL6A2P12110 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
COL6A2P12110 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.44□□□□□ -1.86
COL6A2P12110 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL6A2P12110 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.44□□□□□ -1.86
COL6A2P12110 RNU6-1010P-201ENST00000362757 107 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 RNU4-90P-201ENST00000362773 141 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 RNY1-201ENST00000364228 113 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 RNU6-926P-201ENST00000384075 107 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 ATP5A1P2-201ENST00000412323 255 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 AL365496.1-201ENST00000426885 215 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 AL445584.1-201ENST00000431451 330 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.44□□□□□ -1.86
COL6A2P12110 snoU13.14-201ENST00000459372 104 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 AC090525.1-201ENST00000479116 478 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 SNORA31.1-201ENST00000515993 133 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 SNORA31.5-201ENST00000516190 133 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.44□□□□□ -1.86
COL6A2P12110 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.44□□□□□ -1.86
COL6A2P12110 CYP4A27P-201ENST00000567218 190 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.44□□□□□ -1.86
COL6A2P12110 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.44□□□□□ -1.86
COL6A2P12110 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.44□□□□□ -1.86
COL6A2P12110 AL356575.1-201ENST00000603008 283 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 AL391813.1-201ENST00000603098 260 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 AC009779.6-201ENST00000603972 165 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 AC073657.2-201ENST00000605661 303 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 AL079305.1-201ENST00000623159 3008 ntBASIC3.44□□□□□ -1.86
COL6A2P12110 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL6A2P12110 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
COL6A2P12110 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.43□□□□□ -1.86
COL6A2P12110 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL6A2P12110 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL6A2P12110 Y_RNA.16-201ENST00000362421 102 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 SNORD9-201ENST00000362566 104 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 RNA5SP387-201ENST00000364226 106 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 RNU6-200P-201ENST00000364743 107 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 RNA5SP51-201ENST00000364750 119 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 AL603910.2-201ENST00000407268 136 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 MIR548I3-201ENST00000408378 149 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 MIR548I1-201ENST00000408810 149 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 RNU6-1077P-201ENST00000410506 102 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 Y_RNA.602-201ENST00000410535 92 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 RNU6-1001P-201ENST00000411265 100 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 HSPE1P25-201ENST00000455484 251 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 snoU13.6-201ENST00000458785 104 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.43□□□□□ -1.86
COL6A2P12110 HMGB3P17-201ENST00000504195 649 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 SEPT14P8-201ENST00000508026 178 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 SNORA31.16-201ENST00000516773 139 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 Y_RNA.700-201ENST00000516806 100 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 CYCSP23-201ENST00000519781 313 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 RPS15AP11-201ENST00000594193 385 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 AC012493.2-201ENST00000595083 291 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 AC010900.2-201ENST00000604508 210 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 BX284668.6-201ENST00000606899 438 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 SNORD113-5-201ENST00000607261 78 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.43□□□□□ -1.86
COL6A2P12110 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL6A2P12110 BX322639.1-202ENST00000423987 2213 ntBASIC3.43□□□□□ -1.86
COL6A2P12110 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL6A2P12110 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.43□□□□□ -1.86
COL6A2P12110 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL6A2P12110 MIR208A-201ENST00000362287 71 ntBASIC3.42□□□□□ -1.86
COL6A2P12110 SNORD27-201ENST00000363981 72 ntBASIC3.42□□□□□ -1.86
COL6A2P12110 Y_RNA.230-201ENST00000364348 109 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms