Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 snoU13.14-201ENST00000459372 104 ntBASIC2.09□□□□□ -2.07
KRT3P12035 AC007547.1-201ENST00000462177 490 ntBASIC2.09□□□□□ -2.07
KRT3P12035 AC091874.1-201ENST00000511402 339 ntBASIC2.09□□□□□ -2.07
KRT3P12035 SNORA31.16-201ENST00000516773 139 ntBASIC2.09□□□□□ -2.07
KRT3P12035 RNU6-612P-201ENST00000516909 102 ntBASIC2.09□□□□□ -2.07
KRT3P12035 RNU6-667P-201ENST00000517186 102 ntBASIC2.09□□□□□ -2.07
KRT3P12035 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.09□□□□□ -2.07
KRT3P12035 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.09□□□□□ -2.07
KRT3P12035 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.09□□□□□ -2.07
KRT3P12035 MIR4448-201ENST00000584360 86 ntBASIC2.09□□□□□ -2.07
KRT3P12035 BNIP3P25-201ENST00000596023 559 ntBASIC2.09□□□□□ -2.07
KRT3P12035 AP000907.4-201ENST00000604143 237 ntBASIC2.09□□□□□ -2.07
KRT3P12035 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.09□□□□□ -2.07
KRT3P12035 RMST_3.1-201ENST00000611651 109 ntBASIC2.09□□□□□ -2.07
KRT3P12035 AC093913.1-201ENST00000614178 329 ntBASIC2.09□□□□□ -2.07
KRT3P12035 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
KRT3P12035 RNU6-522P-201ENST00000364497 107 ntBASIC2.08□□□□□ -2.08
KRT3P12035 Y_RNA.256-201ENST00000364594 104 ntBASIC2.08□□□□□ -2.08
KRT3P12035 RNA5SP138-201ENST00000365098 114 ntBASIC2.08□□□□□ -2.08
KRT3P12035 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
KRT3P12035 RNU6-790P-201ENST00000384479 105 ntBASIC2.08□□□□□ -2.08
KRT3P12035 MIR29B2-201ENST00000385055 81 ntBASIC2.08□□□□□ -2.08
KRT3P12035 RNU6-192P-201ENST00000391253 100 ntBASIC2.08□□□□□ -2.08
KRT3P12035 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.08□□□□□ -2.08
KRT3P12035 RNU2-2P-201ENST00000410396 191 ntBASIC2.08□□□□□ -2.08
KRT3P12035 RNA5SP338-201ENST00000410495 85 ntBASIC2.08□□□□□ -2.08
KRT3P12035 FCF1P9-201ENST00000412546 282 ntBASIC2.08□□□□□ -2.08
KRT3P12035 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.08□□□□□ -2.08
KRT3P12035 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.08□□□□□ -2.08
KRT3P12035 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.08□□□□□ -2.08
KRT3P12035 U8.21-201ENST00000459536 136 ntBASIC2.08□□□□□ -2.08
KRT3P12035 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.08□□□□□ -2.08
KRT3P12035 AC145146.1-201ENST00000496370 254 ntBASIC2.08□□□□□ -2.08
KRT3P12035 HMGB1P35-201ENST00000503360 598 ntBASIC2.08□□□□□ -2.08
KRT3P12035 AC025465.4-201ENST00000513422 638 ntBASIC2.08□□□□□ -2.08
KRT3P12035 MIR449C-201ENST00000516047 92 ntBASIC2.08□□□□□ -2.08
KRT3P12035 Y_RNA.665-201ENST00000516177 98 ntBASIC2.08□□□□□ -2.08
KRT3P12035 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.08□□□□□ -2.08
KRT3P12035 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.08□□□□□ -2.08
KRT3P12035 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.08□□□□□ -2.08
KRT3P12035 AP001836.1-201ENST00000604675 523 ntBASIC2.08□□□□□ -2.08
KRT3P12035 AL034555.1-201ENST00000604816 211 ntBASIC2.08□□□□□ -2.08
KRT3P12035 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.08□□□□□ -2.08
KRT3P12035 U2.15-201ENST00000611544 191 ntBASIC2.08□□□□□ -2.08
KRT3P12035 U2.16-201ENST00000613119 191 ntBASIC2.08□□□□□ -2.08
KRT3P12035 U2.12-201ENST00000613778 191 ntBASIC2.08□□□□□ -2.08
KRT3P12035 U2.20-201ENST00000613956 192 ntBASIC2.08□□□□□ -2.08
KRT3P12035 U2.9-201ENST00000615427 191 ntBASIC2.08□□□□□ -2.08
KRT3P12035 U2.11-201ENST00000616345 191 ntBASIC2.08□□□□□ -2.08
KRT3P12035 U2.2-201ENST00000616535 191 ntBASIC2.08□□□□□ -2.08
KRT3P12035 U2.3-201ENST00000617785 191 ntBASIC2.08□□□□□ -2.08
KRT3P12035 U2.19-201ENST00000618602 191 ntBASIC2.08□□□□□ -2.08
KRT3P12035 RNU2-1-201ENST00000618664 191 ntBASIC2.08□□□□□ -2.08
KRT3P12035 U2.6-201ENST00000619225 191 ntBASIC2.08□□□□□ -2.08
KRT3P12035 U2.5-201ENST00000619465 191 ntBASIC2.08□□□□□ -2.08
KRT3P12035 U2.10-201ENST00000620268 191 ntBASIC2.08□□□□□ -2.08
KRT3P12035 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
KRT3P12035 MTND4P23-201ENST00000447723 1363 ntBASIC2.08□□□□□ -2.08
KRT3P12035 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
KRT3P12035 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.08□□□□□ -2.08
KRT3P12035 CENPCP1-201ENST00000533085 2578 ntBASIC2.07□□□□□ -2.08
KRT3P12035 RNU6-254P-201ENST00000363377 107 ntBASIC2.07□□□□□ -2.08
KRT3P12035 RNU6-1285P-201ENST00000363480 105 ntBASIC2.07□□□□□ -2.08
KRT3P12035 SNORD113-7-201ENST00000363762 77 ntBASIC2.07□□□□□ -2.08
KRT3P12035 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
KRT3P12035 SNORA12-201ENST00000391162 147 ntBASIC2.07□□□□□ -2.08
KRT3P12035 RNU6-373P-201ENST00000411247 98 ntBASIC2.07□□□□□ -2.08
KRT3P12035 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.07□□□□□ -2.08
KRT3P12035 Z82205.1-201ENST00000428456 297 ntBASIC2.07□□□□□ -2.08
KRT3P12035 SNAP23P1-201ENST00000433229 246 ntBASIC2.07□□□□□ -2.08
KRT3P12035 NDUFA5P4-201ENST00000436704 385 ntBASIC2.07□□□□□ -2.08
KRT3P12035 UBE2V1P8-201ENST00000437166 265 ntBASIC2.07□□□□□ -2.08
KRT3P12035 RPL32P28-201ENST00000443577 397 ntBASIC2.07□□□□□ -2.08
KRT3P12035 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.07□□□□□ -2.08
KRT3P12035 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.07□□□□□ -2.08
KRT3P12035 SNORA48.11-201ENST00000517015 89 ntBASIC2.07□□□□□ -2.08
KRT3P12035 TRAV32-201ENST00000553993 340 ntBASIC2.07□□□□□ -2.08
KRT3P12035 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.07□□□□□ -2.08
KRT3P12035 MIR4529-201ENST00000578110 78 ntBASIC2.07□□□□□ -2.08
KRT3P12035 AC008749.1-201ENST00000597650 306 ntBASIC2.07□□□□□ -2.08
KRT3P12035 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.07□□□□□ -2.08
KRT3P12035 MIR3688-2-201ENST00000636963 87 ntBASIC2.07□□□□□ -2.08
KRT3P12035 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
KRT3P12035 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
KRT3P12035 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
KRT3P12035 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
KRT3P12035 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.06□□□□□ -2.08
KRT3P12035 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
KRT3P12035 RNA5SP276-201ENST00000362580 94 ntBASIC2.06□□□□□ -2.08
KRT3P12035 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
KRT3P12035 VN1R36P-201ENST00000414936 291 ntBASIC2.06□□□□□ -2.08
KRT3P12035 AC009161.1-201ENST00000417306 376 ntBASIC2.06□□□□□ -2.08
KRT3P12035 USP9YP18-201ENST00000425912 695 ntBASIC2.06□□□□□ -2.08
KRT3P12035 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
KRT3P12035 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.06□□□□□ -2.08
KRT3P12035 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.06□□□□□ -2.08
KRT3P12035 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.06□□□□□ -2.08
KRT3P12035 HMGN2P26-201ENST00000463169 339 ntBASIC2.06□□□□□ -2.08
KRT3P12035 AC016632.1-201ENST00000503994 196 ntBASIC2.06□□□□□ -2.08
KRT3P12035 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms