Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SNORD14.1-201ENST00000365609 90 ntBASIC3.36□□□□□ -1.87
SNRPA1P09661 Y_RNA.452-201ENST00000384202 108 ntBASIC3.36□□□□□ -1.87
SNRPA1P09661 RNU6-784P-201ENST00000384330 106 ntBASIC3.36□□□□□ -1.87
SNRPA1P09661 SNORD116-20-201ENST00000384529 92 ntBASIC3.36□□□□□ -1.87
SNRPA1P09661 Y_RNA.574-201ENST00000384766 95 ntBASIC3.36□□□□□ -1.87
SNRPA1P09661 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
SNRPA1P09661 NDUFS5P4-201ENST00000412983 318 ntBASIC3.36□□□□□ -1.87
SNRPA1P09661 AC009963.1-201ENST00000417265 157 ntBASIC3.36□□□□□ -1.87
SNRPA1P09661 AC007098.1-201ENST00000420122 367 ntBASIC3.36□□□□□ -1.87
SNRPA1P09661 RPL21P2-201ENST00000440049 481 ntBASIC3.36□□□□□ -1.87
SNRPA1P09661 AC131281.1-201ENST00000522984 164 ntBASIC3.36□□□□□ -1.87
SNRPA1P09661 AC022616.4-201ENST00000522985 181 ntBASIC3.36□□□□□ -1.87
SNRPA1P09661 AC040926.1-201ENST00000530195 238 ntBASIC3.36□□□□□ -1.87
SNRPA1P09661 AC027176.1-201ENST00000560204 514 ntBASIC3.36□□□□□ -1.87
SNRPA1P09661 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.36□□□□□ -1.87
SNRPA1P09661 MIR4635-201ENST00000583759 79 ntBASIC3.36□□□□□ -1.87
SNRPA1P09661 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.36□□□□□ -1.87
SNRPA1P09661 HSPE1P7-201ENST00000604681 321 ntBASIC3.36□□□□□ -1.87
SNRPA1P09661 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNRPA1P09661 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SNRPA1P09661 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNRPA1P09661 RNU6-874P-201ENST00000362390 105 ntBASIC3.35□□□□□ -1.87
SNRPA1P09661 Y_RNA.193-201ENST00000363979 102 ntBASIC3.35□□□□□ -1.87
SNRPA1P09661 Y_RNA.512-201ENST00000384518 102 ntBASIC3.35□□□□□ -1.87
SNRPA1P09661 AL512633.1-201ENST00000399931 655 ntBASIC3.35□□□□□ -1.87
SNRPA1P09661 RN7SKP284-201ENST00000411002 343 ntBASIC3.35□□□□□ -1.87
SNRPA1P09661 RNA5SP508-201ENST00000411327 119 ntBASIC3.35□□□□□ -1.87
SNRPA1P09661 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.35□□□□□ -1.87
SNRPA1P09661 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.35□□□□□ -1.87
SNRPA1P09661 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.35□□□□□ -1.87
SNRPA1P09661 RNU6-581P-201ENST00000516214 105 ntBASIC3.35□□□□□ -1.87
SNRPA1P09661 SNORA40.14-201ENST00000516543 86 ntBASIC3.35□□□□□ -1.87
SNRPA1P09661 AC093331.1-201ENST00000521474 169 ntBASIC3.35□□□□□ -1.87
SNRPA1P09661 AL391261.3-201ENST00000557194 520 ntBASIC3.35□□□□□ -1.87
SNRPA1P09661 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.35□□□□□ -1.87
SNRPA1P09661 AL138825.1-201ENST00000618587 192 ntBASIC3.35□□□□□ -1.87
SNRPA1P09661 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.35□□□□□ -1.87
SNRPA1P09661 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SNRPA1P09661 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.34□□□□□ -1.87
SNRPA1P09661 MTND5P27-201ENST00000428871 1720 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 RNU6-858P-201ENST00000362436 107 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 Y_RNA.210-201ENST00000364161 110 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 BTF3L4P2-201ENST00000392798 346 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 FTH1P15-201ENST00000406984 280 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 MIR1302-3-201ENST00000408128 138 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 AP000275.1-201ENST00000411943 390 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.34□□□□□ -1.87
SNRPA1P09661 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.34□□□□□ -1.87
SNRPA1P09661 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.34□□□□□ -1.87
SNRPA1P09661 AL591043.1-201ENST00000432461 424 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.34□□□□□ -1.87
SNRPA1P09661 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SNRPA1P09661 AC006026.2-201ENST00000457376 180 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 snoU13.28-201ENST00000459235 104 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.34□□□□□ -1.87
SNRPA1P09661 Y_RNA.715-201ENST00000517082 110 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 AC109329.2-201ENST00000519658 482 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 AC144568.1-201ENST00000520139 137 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 AL590705.4-201ENST00000532209 134 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 MIR3609-201ENST00000582661 80 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 AC006006.1-201ENST00000603082 144 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 AC016727.2-201ENST00000603988 621 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 Z98751.3-201ENST00000604447 521 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 PRR13P7-201ENST00000605538 430 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 U2.1-201ENST00000618978 145 ntBASIC3.34□□□□□ -1.87
SNRPA1P09661 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.34□□□□□ -1.88
SNRPA1P09661 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SNRPA1P09661 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.33□□□□□ -1.88
SNRPA1P09661 AC009541.1-201ENST00000438279 2662 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 AC233263.6-201ENST00000631132 1963 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 AC092435.3-201ENST00000565538 3654 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 SNORD56.1-201ENST00000362913 68 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 RNU6-1280P-201ENST00000365211 107 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 MIR27B-201ENST00000385129 97 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 MIR1252-201ENST00000408861 65 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.33□□□□□ -1.88
SNRPA1P09661 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.33□□□□□ -1.88
SNRPA1P09661 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.33□□□□□ -1.88
SNRPA1P09661 AC243964.1-201ENST00000441814 261 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.33□□□□□ -1.88
SNRPA1P09661 AC124916.1-201ENST00000444020 547 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 MRPL42P6-201ENST00000486397 371 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 RPL30P10-201ENST00000488148 337 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 MRPS36P4-201ENST00000534436 298 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 AL161670.1-201ENST00000554348 137 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.33□□□□□ -1.88
SNRPA1P09661 HMGN2P15-201ENST00000585707 270 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 AC060766.3-201ENST00000591442 263 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 VN1R91P-201ENST00000594377 169 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 VN1R107P-201ENST00000601784 209 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 7SK.7-201ENST00000603504 247 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 AL355297.3-201ENST00000604082 446 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 AL590808.1-201ENST00000618696 141 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 U4.1-201ENST00000620349 87 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 CTSLP2-204ENST00000629029 392 ntBASIC3.33□□□□□ -1.88
SNRPA1P09661 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.33□□□□□ -1.88
SNRPA1P09661 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.33□□□□□ -1.88
SNRPA1P09661 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.32□□□□□ -1.88
SNRPA1P09661 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 216.3 ms