Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 AC006445.2-201ENST00000510061 472 ntBASIC3.65□□□□□ -1.83
SYPP08247 SNORA31.16-201ENST00000516773 139 ntBASIC3.65□□□□□ -1.83
SYPP08247 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.65□□□□□ -1.83
SYPP08247 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.65□□□□□ -1.83
SYPP08247 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.65□□□□□ -1.83
SYPP08247 AC073308.1-201ENST00000623696 305 ntBASIC3.65□□□□□ -1.83
SYPP08247 SCARNA15.3-201ENST00000626315 122 ntBASIC3.65□□□□□ -1.83
SYPP08247 SCARNA4.1-201ENST00000628597 123 ntBASIC3.65□□□□□ -1.83
SYPP08247 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.65□□□□□ -1.83
SYPP08247 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.65□□□□□ -1.83
SYPP08247 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SYPP08247 AL672296.1-201ENST00000427780 2158 ntBASIC3.65□□□□□ -1.83
SYPP08247 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.64□□□□□ -1.83
SYPP08247 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SYPP08247 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.64□□□□□ -1.83
SYPP08247 CUL1P1-201ENST00000509510 2425 ntBASIC3.64□□□□□ -1.83
SYPP08247 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SYPP08247 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SYPP08247 MIR490-201ENST00000384865 128 ntBASIC3.64□□□□□ -1.83
SYPP08247 RNA5SP424-201ENST00000390988 115 ntBASIC3.64□□□□□ -1.83
SYPP08247 RNU6-918P-201ENST00000391219 106 ntBASIC3.64□□□□□ -1.83
SYPP08247 AC005042.3-201ENST00000453230 174 ntBASIC3.64□□□□□ -1.83
SYPP08247 AC007215.1-201ENST00000464893 276 ntBASIC3.64□□□□□ -1.83
SYPP08247 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.64□□□□□ -1.83
SYPP08247 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.64□□□□□ -1.83
SYPP08247 AC074133.1-201ENST00000515696 183 ntBASIC3.64□□□□□ -1.83
SYPP08247 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.64□□□□□ -1.83
SYPP08247 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.64□□□□□ -1.83
SYPP08247 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.64□□□□□ -1.83
SYPP08247 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SYPP08247 SNORA62.6-201ENST00000606322 83 ntBASIC3.64□□□□□ -1.83
SYPP08247 MIR8058-201ENST00000615737 89 ntBASIC3.64□□□□□ -1.83
SYPP08247 AC021753.1-201ENST00000635724 168 ntBASIC3.64□□□□□ -1.83
SYPP08247 U6.106-201ENST00000636360 105 ntBASIC3.64□□□□□ -1.83
SYPP08247 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.64□□□□□ -1.83
SYPP08247 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SYPP08247 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.64□□□□□ -1.83
SYPP08247 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SYPP08247 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.64□□□□□ -1.83
SYPP08247 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.64□□□□□ -1.83
SYPP08247 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.64□□□□□ -1.83
SYPP08247 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SYPP08247 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SYPP08247 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SYPP08247 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SYPP08247 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SYPP08247 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SYPP08247 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.63□□□□□ -1.83
SYPP08247 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SYPP08247 RNU5F-3P-201ENST00000363767 117 ntBASIC3.63□□□□□ -1.83
SYPP08247 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.63□□□□□ -1.83
SYPP08247 RN7SKP51-201ENST00000410781 304 ntBASIC3.63□□□□□ -1.83
SYPP08247 RNA5SP120-201ENST00000410900 112 ntBASIC3.63□□□□□ -1.83
SYPP08247 AC019205.3-201ENST00000424573 156 ntBASIC3.63□□□□□ -1.83
SYPP08247 UQCRBP2-201ENST00000447827 297 ntBASIC3.63□□□□□ -1.83
SYPP08247 HMGN2P16-201ENST00000456802 261 ntBASIC3.63□□□□□ -1.83
SYPP08247 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.63□□□□□ -1.83
SYPP08247 RNU2-58P-201ENST00000516403 183 ntBASIC3.63□□□□□ -1.83
SYPP08247 RNU6-966P-201ENST00000516479 104 ntBASIC3.63□□□□□ -1.83
SYPP08247 CYCSP23-201ENST00000519781 313 ntBASIC3.63□□□□□ -1.83
SYPP08247 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.63□□□□□ -1.83
SYPP08247 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.63□□□□□ -1.83
SYPP08247 MIR3609-201ENST00000582661 80 ntBASIC3.63□□□□□ -1.83
SYPP08247 HMGN2P15-201ENST00000585707 270 ntBASIC3.63□□□□□ -1.83
SYPP08247 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.63□□□□□ -1.83
SYPP08247 MIR486-1-201ENST00000612171 68 ntBASIC3.63□□□□□ -1.83
SYPP08247 AC073349.3-201ENST00000617616 186 ntBASIC3.63□□□□□ -1.83
SYPP08247 MTND5P35-201ENST00000557537 1720 ntBASIC3.63□□□□□ -1.83
SYPP08247 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.63□□□□□ -1.83
SYPP08247 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.63□□□□□ -1.83
SYPP08247 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SYPP08247 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SYPP08247 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
SYPP08247 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.62□□□□□ -1.83
SYPP08247 ZNF204P-201ENST00000416749 2397 ntBASIC3.62□□□□□ -1.83
SYPP08247 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.62□□□□□ -1.83
SYPP08247 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
SYPP08247 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SYPP08247 SNORD9-201ENST00000362566 104 ntBASIC3.62□□□□□ -1.83
SYPP08247 Y_RNA.170-201ENST00000363746 110 ntBASIC3.62□□□□□ -1.83
SYPP08247 Y_RNA.217-201ENST00000364214 105 ntBASIC3.62□□□□□ -1.83
SYPP08247 RNU1-33P-201ENST00000364249 162 ntBASIC3.62□□□□□ -1.83
SYPP08247 Y_RNA.233-201ENST00000364407 101 ntBASIC3.62□□□□□ -1.83
SYPP08247 Y_RNA.240-201ENST00000364469 95 ntBASIC3.62□□□□□ -1.83
SYPP08247 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.62□□□□□ -1.83
SYPP08247 AC009237.7-201ENST00000447357 229 ntBASIC3.62□□□□□ -1.83
SYPP08247 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.62□□□□□ -1.83
SYPP08247 Y_RNA.641-201ENST00000459414 105 ntBASIC3.62□□□□□ -1.83
SYPP08247 AC090525.1-201ENST00000479116 478 ntBASIC3.62□□□□□ -1.83
SYPP08247 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.62□□□□□ -1.83
SYPP08247 Y_RNA.662-201ENST00000516028 97 ntBASIC3.62□□□□□ -1.83
SYPP08247 RNU6-1278P-201ENST00000516130 107 ntBASIC3.62□□□□□ -1.83
SYPP08247 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.62□□□□□ -1.83
SYPP08247 AC115990.1-201ENST00000526957 301 ntBASIC3.62□□□□□ -1.83
SYPP08247 AC018448.1-201ENST00000552843 316 ntBASIC3.62□□□□□ -1.83
SYPP08247 MZT1P2-201ENST00000604387 248 ntBASIC3.62□□□□□ -1.83
SYPP08247 HSPE1P7-201ENST00000604681 321 ntBASIC3.62□□□□□ -1.83
SYPP08247 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.62□□□□□ -1.83
SYPP08247 MIR3199-2-201ENST00000636243 86 ntBASIC3.62□□□□□ -1.83
SYPP08247 AP000553.6-201ENST00000641242 118 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms